Gene : Thecc1EG030257 T. cacao v1.1
Defline:  (1 of 2) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  2163
Name:  ? Thecc1EG030257 Secondary Identifier:  ? PAC:27437616
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5084 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030257 0.5kb upstream 0.5kb upstream 4774 true scaffold_6: 26405633-26410406 Theobroma cacao
Thecc1EG030257 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26409907-26410406 Theobroma cacao
Thecc1EG030257 0.5kb downstream 0.5kb downstream 4774 true scaffold_6: 26405133-26409906 Theobroma cacao
Thecc1EG030257 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26405133-26405632 Theobroma cacao
Thecc1EG030257 1.0kb upstream 1.0kb upstream 5274 true scaffold_6: 26405633-26410906 Theobroma cacao
Thecc1EG030257 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26409907-26410906 Theobroma cacao
Thecc1EG030257 1.0kb downstream 1.0kb downstream 5274 true scaffold_6: 26404633-26409906 Theobroma cacao
Thecc1EG030257 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26404633-26405632 Theobroma cacao
Thecc1EG030257 2.0kb upstream 2.0kb upstream 6274 true scaffold_6: 26405633-26411906 Theobroma cacao
Thecc1EG030257 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26409907-26411906 Theobroma cacao
Thecc1EG030257 2.0kb downstream 2.0kb downstream 6274 true scaffold_6: 26403633-26409906 Theobroma cacao
Thecc1EG030257 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26403633-26405632 Theobroma cacao
Thecc1EG030257 5.0kb upstream 5.0kb upstream 9274 true scaffold_6: 26405633-26414906 Theobroma cacao
Thecc1EG030257 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26409907-26414906 Theobroma cacao
Thecc1EG030257 5.0kb downstream 5.0kb downstream 9274 true scaffold_6: 26400633-26409906 Theobroma cacao
Thecc1EG030257 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26400633-26405632 Theobroma cacao
Thecc1EG030257 10.0kb upstream 10.0kb upstream 14274 true scaffold_6: 26405633-26419906 Theobroma cacao
Thecc1EG030257 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26409907-26419906 Theobroma cacao
Thecc1EG030257 10.0kb downstream 10.0kb downstream 14274 true scaffold_6: 26395633-26409906 Theobroma cacao
Thecc1EG030257 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26395633-26405632 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838831 5264 Brassicales-Malvales View MSA
124322502 5266 SBM View MSA
124169155 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain