Gene : Thecc1EG030242 T. cacao v1.1
Defline:  (1 of 3) 4.2.1.51//4.2.1.91 - Prephenate dehydratase // Arogenate dehydratase / Carboxycyclohexadienyl dehydratase Genomic Order:  2149
Name:  ? Thecc1EG030242 Secondary Identifier:  ? PAC:27439966
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3462 Theobroma cacao pathologic  
Tcacao PWY-3481 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030242 0.5kb upstream 0.5kb upstream 5336 true scaffold_6: 26357664-26362999 Theobroma cacao
Thecc1EG030242 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26357664-26358163 Theobroma cacao
Thecc1EG030242 0.5kb downstream 0.5kb downstream 5336 true scaffold_6: 26358164-26363499 Theobroma cacao
Thecc1EG030242 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26363000-26363499 Theobroma cacao
Thecc1EG030242 1.0kb upstream 1.0kb upstream 5836 true scaffold_6: 26357164-26362999 Theobroma cacao
Thecc1EG030242 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26357164-26358163 Theobroma cacao
Thecc1EG030242 1.0kb downstream 1.0kb downstream 5836 true scaffold_6: 26358164-26363999 Theobroma cacao
Thecc1EG030242 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26363000-26363999 Theobroma cacao
Thecc1EG030242 2.0kb upstream 2.0kb upstream 6836 true scaffold_6: 26356164-26362999 Theobroma cacao
Thecc1EG030242 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26356164-26358163 Theobroma cacao
Thecc1EG030242 2.0kb downstream 2.0kb downstream 6836 true scaffold_6: 26358164-26364999 Theobroma cacao
Thecc1EG030242 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26363000-26364999 Theobroma cacao
Thecc1EG030242 5.0kb upstream 5.0kb upstream 9836 true scaffold_6: 26353164-26362999 Theobroma cacao
Thecc1EG030242 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26353164-26358163 Theobroma cacao
Thecc1EG030242 5.0kb downstream 5.0kb downstream 9836 true scaffold_6: 26358164-26367999 Theobroma cacao
Thecc1EG030242 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26363000-26367999 Theobroma cacao
Thecc1EG030242 10.0kb upstream 10.0kb upstream 14836 true scaffold_6: 26348164-26362999 Theobroma cacao
Thecc1EG030242 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26348164-26358163 Theobroma cacao
Thecc1EG030242 10.0kb downstream 10.0kb downstream 14836 true scaffold_6: 26358164-26372999 Theobroma cacao
Thecc1EG030242 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26363000-26372999 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840992 5264 Brassicales-Malvales View MSA
124349569 5266 SBM View MSA
124243895 5268 Malvidae View MSA
124070926 5270 Rosid View MSA
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain