Gene : Pavir.2KG091100 P. virgatum v4.1
Defline:  (1 of 6) PTHR11452//PTHR11452:SF32 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  832
Name:  ? Pavir.2KG091100 Secondary Identifier:  ? PAC:37570074
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY0-1301 Panicum virgatum pathologic  
Pvirgatum PWY-6527 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG091100 0.5kb upstream 0.5kb upstream 2888 true Chr02K: 11440461-11443348 Panicum virgatum
Pavir.2KG091100 0.5kb upstream 0.5kb upstream 500 false Chr02K: 11440461-11440960 Panicum virgatum
Pavir.2KG091100 0.5kb downstream 0.5kb downstream 2888 true Chr02K: 11440961-11443848 Panicum virgatum
Pavir.2KG091100 0.5kb downstream 0.5kb downstream 500 false Chr02K: 11443349-11443848 Panicum virgatum
Pavir.2KG091100 1.0kb upstream 1.0kb upstream 3388 true Chr02K: 11439961-11443348 Panicum virgatum
Pavir.2KG091100 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 11439961-11440960 Panicum virgatum
Pavir.2KG091100 1.0kb downstream 1.0kb downstream 3388 true Chr02K: 11440961-11444348 Panicum virgatum
Pavir.2KG091100 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 11443349-11444348 Panicum virgatum
Pavir.2KG091100 2.0kb upstream 2.0kb upstream 4388 true Chr02K: 11438961-11443348 Panicum virgatum
Pavir.2KG091100 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 11438961-11440960 Panicum virgatum
Pavir.2KG091100 2.0kb downstream 2.0kb downstream 4388 true Chr02K: 11440961-11445348 Panicum virgatum
Pavir.2KG091100 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 11443349-11445348 Panicum virgatum
Pavir.2KG091100 5.0kb upstream 5.0kb upstream 7388 true Chr02K: 11435961-11443348 Panicum virgatum
Pavir.2KG091100 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 11435961-11440960 Panicum virgatum
Pavir.2KG091100 5.0kb downstream 5.0kb downstream 7388 true Chr02K: 11440961-11448348 Panicum virgatum
Pavir.2KG091100 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 11443349-11448348 Panicum virgatum
Pavir.2KG091100 10.0kb upstream 10.0kb upstream 12388 true Chr02K: 11430961-11443348 Panicum virgatum
Pavir.2KG091100 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 11430961-11440960 Panicum virgatum
Pavir.2KG091100 10.0kb downstream 10.0kb downstream 12388 true Chr02K: 11440961-11453348 Panicum virgatum
Pavir.2KG091100 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 11443349-11453348 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192526 5267 Panicoideae View MSA
124466351 5269 Grass View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain