Gene : Thecc1EG030498 T. cacao v1.1
Defline:  (1 of 1) PTHR31636:SF2 - SCARECROW-LIKE PROTEIN 18 Genomic Order:  2
Name:  ? Thecc1EG030498 Secondary Identifier:  ? PAC:27446166
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030498 0.5kb upstream 0.5kb upstream 2905 true scaffold_7: 16546-19450 Theobroma cacao
Thecc1EG030498 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 16546-17045 Theobroma cacao
Thecc1EG030498 0.5kb downstream 0.5kb downstream 2905 true scaffold_7: 17046-19950 Theobroma cacao
Thecc1EG030498 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 19451-19950 Theobroma cacao
Thecc1EG030498 1.0kb upstream 1.0kb upstream 3405 true scaffold_7: 16046-19450 Theobroma cacao
Thecc1EG030498 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 16046-17045 Theobroma cacao
Thecc1EG030498 1.0kb downstream 1.0kb downstream 3405 true scaffold_7: 17046-20450 Theobroma cacao
Thecc1EG030498 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 19451-20450 Theobroma cacao
Thecc1EG030498 2.0kb upstream 2.0kb upstream 4405 true scaffold_7: 15046-19450 Theobroma cacao
Thecc1EG030498 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 15046-17045 Theobroma cacao
Thecc1EG030498 2.0kb downstream 2.0kb downstream 4405 true scaffold_7: 17046-21450 Theobroma cacao
Thecc1EG030498 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 19451-21450 Theobroma cacao
Thecc1EG030498 5.0kb upstream 5.0kb upstream 7405 true scaffold_7: 12046-19450 Theobroma cacao
Thecc1EG030498 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 12046-17045 Theobroma cacao
Thecc1EG030498 5.0kb downstream 5.0kb downstream 7405 true scaffold_7: 17046-24450 Theobroma cacao
Thecc1EG030498 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 19451-24450 Theobroma cacao
Thecc1EG030498 10.0kb upstream 10.0kb upstream 12405 true scaffold_7: 7046-19450 Theobroma cacao
Thecc1EG030498 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7046-17045 Theobroma cacao
Thecc1EG030498 10.0kb downstream 10.0kb downstream 12405 true scaffold_7: 17046-29450 Theobroma cacao
Thecc1EG030498 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 19451-29450 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832750 5264 Brassicales-Malvales View MSA
124344585 5266 SBM View MSA
124248059 5268 Malvidae View MSA
124068320 5270 Rosid View MSA
123745954 5271 Pentapetalae View MSA
122792693 5272 Eudicot View MSA
122041925 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain