Gene : Pavir.2KG071200 P. virgatum v4.1
Defline:  (1 of 2) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  657
Name:  ? Pavir.2KG071200 Secondary Identifier:  ? PAC:37565655
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG071200 0.5kb upstream 0.5kb upstream 5222 true Chr02K: 8296387-8301608 Panicum virgatum
Pavir.2KG071200 0.5kb upstream 0.5kb upstream 500 false Chr02K: 8296387-8296886 Panicum virgatum
Pavir.2KG071200 0.5kb downstream 0.5kb downstream 5222 true Chr02K: 8296887-8302108 Panicum virgatum
Pavir.2KG071200 0.5kb downstream 0.5kb downstream 500 false Chr02K: 8301609-8302108 Panicum virgatum
Pavir.2KG071200 1.0kb upstream 1.0kb upstream 5722 true Chr02K: 8295887-8301608 Panicum virgatum
Pavir.2KG071200 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 8295887-8296886 Panicum virgatum
Pavir.2KG071200 1.0kb downstream 1.0kb downstream 5722 true Chr02K: 8296887-8302608 Panicum virgatum
Pavir.2KG071200 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 8301609-8302608 Panicum virgatum
Pavir.2KG071200 2.0kb upstream 2.0kb upstream 6722 true Chr02K: 8294887-8301608 Panicum virgatum
Pavir.2KG071200 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 8294887-8296886 Panicum virgatum
Pavir.2KG071200 2.0kb downstream 2.0kb downstream 6722 true Chr02K: 8296887-8303608 Panicum virgatum
Pavir.2KG071200 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 8301609-8303608 Panicum virgatum
Pavir.2KG071200 5.0kb upstream 5.0kb upstream 9722 true Chr02K: 8291887-8301608 Panicum virgatum
Pavir.2KG071200 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 8291887-8296886 Panicum virgatum
Pavir.2KG071200 5.0kb downstream 5.0kb downstream 9722 true Chr02K: 8296887-8306608 Panicum virgatum
Pavir.2KG071200 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 8301609-8306608 Panicum virgatum
Pavir.2KG071200 10.0kb upstream 10.0kb upstream 14722 true Chr02K: 8286887-8301608 Panicum virgatum
Pavir.2KG071200 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 8286887-8296886 Panicum virgatum
Pavir.2KG071200 10.0kb downstream 10.0kb downstream 14722 true Chr02K: 8296887-8311608 Panicum virgatum
Pavir.2KG071200 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 8301609-8311608 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179040 5267 Panicoideae View MSA
124581859 5269 Grass View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain