Gene : Thecc1EG046828 T. cacao v1.1
Defline:  (1 of 3) K01853 - cycloartenol synthase (E5.4.99.8) Genomic Order:  528
Name:  ? Thecc1EG046828 Secondary Identifier:  ? PAC:27440095
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2541 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046828 0.5kb upstream 0.5kb upstream 26330 true scaffold_6: 6437620-6463949 Theobroma cacao
Thecc1EG046828 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6463450-6463949 Theobroma cacao
Thecc1EG046828 0.5kb downstream 0.5kb downstream 26330 true scaffold_6: 6437120-6463449 Theobroma cacao
Thecc1EG046828 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6437120-6437619 Theobroma cacao
Thecc1EG046828 1.0kb upstream 1.0kb upstream 26830 true scaffold_6: 6437620-6464449 Theobroma cacao
Thecc1EG046828 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6463450-6464449 Theobroma cacao
Thecc1EG046828 1.0kb downstream 1.0kb downstream 26830 true scaffold_6: 6436620-6463449 Theobroma cacao
Thecc1EG046828 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6436620-6437619 Theobroma cacao
Thecc1EG046828 2.0kb upstream 2.0kb upstream 27830 true scaffold_6: 6437620-6465449 Theobroma cacao
Thecc1EG046828 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6463450-6465449 Theobroma cacao
Thecc1EG046828 2.0kb downstream 2.0kb downstream 27830 true scaffold_6: 6435620-6463449 Theobroma cacao
Thecc1EG046828 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6435620-6437619 Theobroma cacao
Thecc1EG046828 5.0kb upstream 5.0kb upstream 30830 true scaffold_6: 6437620-6468449 Theobroma cacao
Thecc1EG046828 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6463450-6468449 Theobroma cacao
Thecc1EG046828 5.0kb downstream 5.0kb downstream 30830 true scaffold_6: 6432620-6463449 Theobroma cacao
Thecc1EG046828 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6432620-6437619 Theobroma cacao
Thecc1EG046828 10.0kb upstream 10.0kb upstream 35830 true scaffold_6: 6437620-6473449 Theobroma cacao
Thecc1EG046828 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6463450-6473449 Theobroma cacao
Thecc1EG046828 10.0kb downstream 10.0kb downstream 35830 true scaffold_6: 6427620-6463449 Theobroma cacao
Thecc1EG046828 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6427620-6437619 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826186 5264 Brassicales-Malvales View MSA
124320930 5266 SBM View MSA
124248409 5268 Malvidae View MSA
124061853 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain