Gene : Thecc1EG030480 T. cacao v1.1
Defline:  (1 of 1) PTHR31314//PTHR31314:SF5 - FAMILY NOT NAMED // MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN-RELATED Genomic Order:  2360
Name:  ? Thecc1EG030480 Secondary Identifier:  ? PAC:27440690
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030480 0.5kb upstream 0.5kb upstream 6969 true scaffold_6: 27220916-27227884 Theobroma cacao
Thecc1EG030480 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 27220916-27221415 Theobroma cacao
Thecc1EG030480 0.5kb downstream 0.5kb downstream 6969 true scaffold_6: 27221416-27228384 Theobroma cacao
Thecc1EG030480 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 27227885-27228384 Theobroma cacao
Thecc1EG030480 1.0kb upstream 1.0kb upstream 7469 true scaffold_6: 27220416-27227884 Theobroma cacao
Thecc1EG030480 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 27220416-27221415 Theobroma cacao
Thecc1EG030480 1.0kb downstream 1.0kb downstream 7469 true scaffold_6: 27221416-27228884 Theobroma cacao
Thecc1EG030480 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 27227885-27228884 Theobroma cacao
Thecc1EG030480 2.0kb upstream 2.0kb upstream 8469 true scaffold_6: 27219416-27227884 Theobroma cacao
Thecc1EG030480 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 27219416-27221415 Theobroma cacao
Thecc1EG030480 2.0kb downstream 2.0kb downstream 8469 true scaffold_6: 27221416-27229884 Theobroma cacao
Thecc1EG030480 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 27227885-27229884 Theobroma cacao
Thecc1EG030480 5.0kb upstream 5.0kb upstream 11469 true scaffold_6: 27216416-27227884 Theobroma cacao
Thecc1EG030480 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 27216416-27221415 Theobroma cacao
Thecc1EG030480 5.0kb downstream 5.0kb downstream 11469 true scaffold_6: 27221416-27232884 Theobroma cacao
Thecc1EG030480 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 27227885-27232884 Theobroma cacao
Thecc1EG030480 10.0kb upstream 10.0kb upstream 16469 true scaffold_6: 27211416-27227884 Theobroma cacao
Thecc1EG030480 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 27211416-27221415 Theobroma cacao
Thecc1EG030480 10.0kb downstream 10.0kb downstream 16469 true scaffold_6: 27221416-27237884 Theobroma cacao
Thecc1EG030480 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 27227885-27237884 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830565 5264 Brassicales-Malvales View MSA
124337302 5266 SBM View MSA
124253480 5268 Malvidae View MSA
124060454 5270 Rosid View MSA
123742883 5271 Pentapetalae View MSA
122794375 5272 Eudicot View MSA
122045611 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain