Gene : Thecc1EG030450 T. cacao v1.1
Defline:  (1 of 1) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Genomic Order:  2332
Name:  ? Thecc1EG030450 Secondary Identifier:  ? PAC:27438647
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030450 0.5kb upstream 0.5kb upstream 2878 true scaffold_6: 27095864-27098741 Theobroma cacao
Thecc1EG030450 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 27095864-27096363 Theobroma cacao
Thecc1EG030450 0.5kb downstream 0.5kb downstream 2878 true scaffold_6: 27096364-27099241 Theobroma cacao
Thecc1EG030450 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 27098742-27099241 Theobroma cacao
Thecc1EG030450 1.0kb upstream 1.0kb upstream 3378 true scaffold_6: 27095364-27098741 Theobroma cacao
Thecc1EG030450 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 27095364-27096363 Theobroma cacao
Thecc1EG030450 1.0kb downstream 1.0kb downstream 3378 true scaffold_6: 27096364-27099741 Theobroma cacao
Thecc1EG030450 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 27098742-27099741 Theobroma cacao
Thecc1EG030450 2.0kb upstream 2.0kb upstream 4378 true scaffold_6: 27094364-27098741 Theobroma cacao
Thecc1EG030450 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 27094364-27096363 Theobroma cacao
Thecc1EG030450 2.0kb downstream 2.0kb downstream 4378 true scaffold_6: 27096364-27100741 Theobroma cacao
Thecc1EG030450 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 27098742-27100741 Theobroma cacao
Thecc1EG030450 5.0kb upstream 5.0kb upstream 7378 true scaffold_6: 27091364-27098741 Theobroma cacao
Thecc1EG030450 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 27091364-27096363 Theobroma cacao
Thecc1EG030450 5.0kb downstream 5.0kb downstream 7378 true scaffold_6: 27096364-27103741 Theobroma cacao
Thecc1EG030450 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 27098742-27103741 Theobroma cacao
Thecc1EG030450 10.0kb upstream 10.0kb upstream 12378 true scaffold_6: 27086364-27098741 Theobroma cacao
Thecc1EG030450 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 27086364-27096363 Theobroma cacao
Thecc1EG030450 10.0kb downstream 10.0kb downstream 12378 true scaffold_6: 27096364-27108741 Theobroma cacao
Thecc1EG030450 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 27098742-27108741 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831862 5264 Brassicales-Malvales View MSA
124344004 5266 SBM View MSA
124237545 5268 Malvidae View MSA
124050829 5270 Rosid View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain