Gene : Thecc1EG030451 T. cacao v1.1
Defline:  (1 of 2) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  2333
Name:  ? Thecc1EG030451 Secondary Identifier:  ? PAC:27438161
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ILEUDEG-PWY Theobroma cacao pathologic  
Tcacao PWY-5910 Theobroma cacao pathologic  
Tcacao PWY-922 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030451 0.5kb upstream 0.5kb upstream 5985 true scaffold_6: 27098291-27104275 Theobroma cacao
Thecc1EG030451 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 27098291-27098790 Theobroma cacao
Thecc1EG030451 0.5kb downstream 0.5kb downstream 5985 true scaffold_6: 27098791-27104775 Theobroma cacao
Thecc1EG030451 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 27104276-27104775 Theobroma cacao
Thecc1EG030451 1.0kb upstream 1.0kb upstream 6485 true scaffold_6: 27097791-27104275 Theobroma cacao
Thecc1EG030451 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 27097791-27098790 Theobroma cacao
Thecc1EG030451 1.0kb downstream 1.0kb downstream 6485 true scaffold_6: 27098791-27105275 Theobroma cacao
Thecc1EG030451 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 27104276-27105275 Theobroma cacao
Thecc1EG030451 2.0kb upstream 2.0kb upstream 7485 true scaffold_6: 27096791-27104275 Theobroma cacao
Thecc1EG030451 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 27096791-27098790 Theobroma cacao
Thecc1EG030451 2.0kb downstream 2.0kb downstream 7485 true scaffold_6: 27098791-27106275 Theobroma cacao
Thecc1EG030451 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 27104276-27106275 Theobroma cacao
Thecc1EG030451 5.0kb upstream 5.0kb upstream 10485 true scaffold_6: 27093791-27104275 Theobroma cacao
Thecc1EG030451 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 27093791-27098790 Theobroma cacao
Thecc1EG030451 5.0kb downstream 5.0kb downstream 10485 true scaffold_6: 27098791-27109275 Theobroma cacao
Thecc1EG030451 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 27104276-27109275 Theobroma cacao
Thecc1EG030451 10.0kb upstream 10.0kb upstream 15485 true scaffold_6: 27088791-27104275 Theobroma cacao
Thecc1EG030451 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 27088791-27098790 Theobroma cacao
Thecc1EG030451 10.0kb downstream 10.0kb downstream 15485 true scaffold_6: 27098791-27114275 Theobroma cacao
Thecc1EG030451 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 27104276-27114275 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830193 5264 Brassicales-Malvales View MSA
124338092 5266 SBM View MSA
124247085 5268 Malvidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain