Gene : Thecc1EG030428 T. cacao v1.1
Defline:  (1 of 467) PF13041 - PPR repeat family (PPR_2) Genomic Order:  2314
Name:  ? Thecc1EG030428 Secondary Identifier:  ? PAC:27439537
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030428 0.5kb upstream 0.5kb upstream 2512 true scaffold_6: 27010647-27013158 Theobroma cacao
Thecc1EG030428 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 27012659-27013158 Theobroma cacao
Thecc1EG030428 0.5kb downstream 0.5kb downstream 2512 true scaffold_6: 27010147-27012658 Theobroma cacao
Thecc1EG030428 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 27010147-27010646 Theobroma cacao
Thecc1EG030428 1.0kb upstream 1.0kb upstream 3012 true scaffold_6: 27010647-27013658 Theobroma cacao
Thecc1EG030428 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 27012659-27013658 Theobroma cacao
Thecc1EG030428 1.0kb downstream 1.0kb downstream 3012 true scaffold_6: 27009647-27012658 Theobroma cacao
Thecc1EG030428 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 27009647-27010646 Theobroma cacao
Thecc1EG030428 2.0kb upstream 2.0kb upstream 4012 true scaffold_6: 27010647-27014658 Theobroma cacao
Thecc1EG030428 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 27012659-27014658 Theobroma cacao
Thecc1EG030428 2.0kb downstream 2.0kb downstream 4012 true scaffold_6: 27008647-27012658 Theobroma cacao
Thecc1EG030428 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 27008647-27010646 Theobroma cacao
Thecc1EG030428 5.0kb upstream 5.0kb upstream 7012 true scaffold_6: 27010647-27017658 Theobroma cacao
Thecc1EG030428 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 27012659-27017658 Theobroma cacao
Thecc1EG030428 5.0kb downstream 5.0kb downstream 7012 true scaffold_6: 27005647-27012658 Theobroma cacao
Thecc1EG030428 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 27005647-27010646 Theobroma cacao
Thecc1EG030428 10.0kb upstream 10.0kb upstream 12012 true scaffold_6: 27010647-27022658 Theobroma cacao
Thecc1EG030428 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 27012659-27022658 Theobroma cacao
Thecc1EG030428 10.0kb downstream 10.0kb downstream 12012 true scaffold_6: 27000647-27012658 Theobroma cacao
Thecc1EG030428 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 27000647-27010646 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029535 5273 Angiosperm View MSA
123821086 5264 Brassicales-Malvales Singleton cluster - no MSA
124317278 5266 SBM Singleton cluster - no MSA
124166026 5268 Malvidae Singleton cluster - no MSA
124038099 5270 Rosid View MSA
123752730 5271 Pentapetalae View MSA
122774759 5272 Eudicot View MSA
121298852 5274 Embryophyte View MSA
123336794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain