Gene : Thecc1EG030410 T. cacao v1.1
Defline:  (1 of 3) PF01426//PF05641 - BAH domain (BAH) // Agenet domain (Agenet) Genomic Order:  2298
Name:  ? Thecc1EG030410 Secondary Identifier:  ? PAC:27438347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030410 0.5kb upstream 0.5kb upstream 6788 true scaffold_6: 26942901-26949688 Theobroma cacao
Thecc1EG030410 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26949189-26949688 Theobroma cacao
Thecc1EG030410 0.5kb downstream 0.5kb downstream 6788 true scaffold_6: 26942401-26949188 Theobroma cacao
Thecc1EG030410 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26942401-26942900 Theobroma cacao
Thecc1EG030410 1.0kb upstream 1.0kb upstream 7288 true scaffold_6: 26942901-26950188 Theobroma cacao
Thecc1EG030410 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26949189-26950188 Theobroma cacao
Thecc1EG030410 1.0kb downstream 1.0kb downstream 7288 true scaffold_6: 26941901-26949188 Theobroma cacao
Thecc1EG030410 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26941901-26942900 Theobroma cacao
Thecc1EG030410 2.0kb upstream 2.0kb upstream 8288 true scaffold_6: 26942901-26951188 Theobroma cacao
Thecc1EG030410 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26949189-26951188 Theobroma cacao
Thecc1EG030410 2.0kb downstream 2.0kb downstream 8288 true scaffold_6: 26940901-26949188 Theobroma cacao
Thecc1EG030410 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26940901-26942900 Theobroma cacao
Thecc1EG030410 5.0kb upstream 5.0kb upstream 11288 true scaffold_6: 26942901-26954188 Theobroma cacao
Thecc1EG030410 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26949189-26954188 Theobroma cacao
Thecc1EG030410 5.0kb downstream 5.0kb downstream 11288 true scaffold_6: 26937901-26949188 Theobroma cacao
Thecc1EG030410 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26937901-26942900 Theobroma cacao
Thecc1EG030410 10.0kb upstream 10.0kb upstream 16288 true scaffold_6: 26942901-26959188 Theobroma cacao
Thecc1EG030410 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26949189-26959188 Theobroma cacao
Thecc1EG030410 10.0kb downstream 10.0kb downstream 16288 true scaffold_6: 26932901-26949188 Theobroma cacao
Thecc1EG030410 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26932901-26942900 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820801 5264 Brassicales-Malvales Singleton cluster - no MSA
124347403 5266 SBM View MSA
124245718 5268 Malvidae View MSA
124050625 5270 Rosid View MSA
123742959 5271 Pentapetalae View MSA
122786842 5272 Eudicot View MSA
122047439 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain