Gene : Thecc1EG030408 T. cacao v1.1

Defline:  (1 of 3) K11314 - transcriptional adapter 2-alpha (TADA2A, ADA2) Genomic Order:  2296
Name:  ? Thecc1EG030408 Secondary Identifier:  ? PAC:27440417

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030408 0.5kb upstream 0.5kb upstream 6127 true scaffold_6: 26933327-26939453 Theobroma cacao
Thecc1EG030408 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26933327-26933826 Theobroma cacao
Thecc1EG030408 0.5kb downstream 0.5kb downstream 6127 true scaffold_6: 26933827-26939953 Theobroma cacao
Thecc1EG030408 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26939454-26939953 Theobroma cacao
Thecc1EG030408 1.0kb upstream 1.0kb upstream 6627 true scaffold_6: 26932827-26939453 Theobroma cacao
Thecc1EG030408 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26932827-26933826 Theobroma cacao
Thecc1EG030408 1.0kb downstream 1.0kb downstream 6627 true scaffold_6: 26933827-26940453 Theobroma cacao
Thecc1EG030408 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26939454-26940453 Theobroma cacao
Thecc1EG030408 2.0kb upstream 2.0kb upstream 7627 true scaffold_6: 26931827-26939453 Theobroma cacao
Thecc1EG030408 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26931827-26933826 Theobroma cacao
Thecc1EG030408 2.0kb downstream 2.0kb downstream 7627 true scaffold_6: 26933827-26941453 Theobroma cacao
Thecc1EG030408 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26939454-26941453 Theobroma cacao
Thecc1EG030408 5.0kb upstream 5.0kb upstream 10627 true scaffold_6: 26928827-26939453 Theobroma cacao
Thecc1EG030408 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26928827-26933826 Theobroma cacao
Thecc1EG030408 5.0kb downstream 5.0kb downstream 10627 true scaffold_6: 26933827-26944453 Theobroma cacao
Thecc1EG030408 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26939454-26944453 Theobroma cacao
Thecc1EG030408 10.0kb upstream 10.0kb upstream 15627 true scaffold_6: 26923827-26939453 Theobroma cacao
Thecc1EG030408 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26923827-26933826 Theobroma cacao
Thecc1EG030408 10.0kb downstream 10.0kb downstream 15627 true scaffold_6: 26933827-26949453 Theobroma cacao
Thecc1EG030408 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26939454-26949453 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828115 5264 Brassicales-Malvales View MSA
124340175 5266 SBM View MSA
124238534 5268 Malvidae View MSA
124070548 5270 Rosid View MSA
123743147 5271 Pentapetalae View MSA
122791432 5272 Eudicot View MSA
122047628 5273 Angiosperm View MSA
121346644 5274 Embryophyte View MSA
123425030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain