Gene : Thecc1EG030393 T. cacao v1.1
Defline:  (1 of 1) PTHR31636:SF45 - SCARECROW-LIKE PROTEIN 13 Genomic Order:  2287
Name:  ? Thecc1EG030393 Secondary Identifier:  ? PAC:27439267
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030393 0.5kb upstream 0.5kb upstream 4354 true scaffold_6: 26891915-26896268 Theobroma cacao
Thecc1EG030393 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26895769-26896268 Theobroma cacao
Thecc1EG030393 0.5kb downstream 0.5kb downstream 4354 true scaffold_6: 26891415-26895768 Theobroma cacao
Thecc1EG030393 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26891415-26891914 Theobroma cacao
Thecc1EG030393 1.0kb upstream 1.0kb upstream 4854 true scaffold_6: 26891915-26896768 Theobroma cacao
Thecc1EG030393 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26895769-26896768 Theobroma cacao
Thecc1EG030393 1.0kb downstream 1.0kb downstream 4854 true scaffold_6: 26890915-26895768 Theobroma cacao
Thecc1EG030393 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26890915-26891914 Theobroma cacao
Thecc1EG030393 2.0kb upstream 2.0kb upstream 5854 true scaffold_6: 26891915-26897768 Theobroma cacao
Thecc1EG030393 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26895769-26897768 Theobroma cacao
Thecc1EG030393 2.0kb downstream 2.0kb downstream 5854 true scaffold_6: 26889915-26895768 Theobroma cacao
Thecc1EG030393 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26889915-26891914 Theobroma cacao
Thecc1EG030393 5.0kb upstream 5.0kb upstream 8854 true scaffold_6: 26891915-26900768 Theobroma cacao
Thecc1EG030393 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26895769-26900768 Theobroma cacao
Thecc1EG030393 5.0kb downstream 5.0kb downstream 8854 true scaffold_6: 26886915-26895768 Theobroma cacao
Thecc1EG030393 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26886915-26891914 Theobroma cacao
Thecc1EG030393 10.0kb upstream 10.0kb upstream 13854 true scaffold_6: 26891915-26905768 Theobroma cacao
Thecc1EG030393 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26895769-26905768 Theobroma cacao
Thecc1EG030393 10.0kb downstream 10.0kb downstream 13854 true scaffold_6: 26881915-26895768 Theobroma cacao
Thecc1EG030393 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26881915-26891914 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835909 5264 Brassicales-Malvales View MSA
124338129 5266 SBM View MSA
124240413 5268 Malvidae View MSA
124063713 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain