Gene : Pavir.2KG347600 P. virgatum v4.1
Defline:  (1 of 2) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) Genomic Order:  3170
Name:  ? Pavir.2KG347600 Secondary Identifier:  ? PAC:37566967
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7511 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG347600 0.5kb upstream 0.5kb upstream 4076 true Chr02K: 67848022-67852097 Panicum virgatum
Pavir.2KG347600 0.5kb upstream 0.5kb upstream 500 false Chr02K: 67851598-67852097 Panicum virgatum
Pavir.2KG347600 0.5kb downstream 0.5kb downstream 4076 true Chr02K: 67847522-67851597 Panicum virgatum
Pavir.2KG347600 0.5kb downstream 0.5kb downstream 500 false Chr02K: 67847522-67848021 Panicum virgatum
Pavir.2KG347600 1.0kb upstream 1.0kb upstream 4576 true Chr02K: 67848022-67852597 Panicum virgatum
Pavir.2KG347600 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 67851598-67852597 Panicum virgatum
Pavir.2KG347600 1.0kb downstream 1.0kb downstream 4576 true Chr02K: 67847022-67851597 Panicum virgatum
Pavir.2KG347600 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 67847022-67848021 Panicum virgatum
Pavir.2KG347600 2.0kb upstream 2.0kb upstream 5576 true Chr02K: 67848022-67853597 Panicum virgatum
Pavir.2KG347600 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 67851598-67853597 Panicum virgatum
Pavir.2KG347600 2.0kb downstream 2.0kb downstream 5576 true Chr02K: 67846022-67851597 Panicum virgatum
Pavir.2KG347600 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 67846022-67848021 Panicum virgatum
Pavir.2KG347600 5.0kb upstream 5.0kb upstream 8576 true Chr02K: 67848022-67856597 Panicum virgatum
Pavir.2KG347600 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 67851598-67856597 Panicum virgatum
Pavir.2KG347600 5.0kb downstream 5.0kb downstream 8576 true Chr02K: 67843022-67851597 Panicum virgatum
Pavir.2KG347600 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 67843022-67848021 Panicum virgatum
Pavir.2KG347600 10.0kb upstream 10.0kb upstream 13576 true Chr02K: 67848022-67861597 Panicum virgatum
Pavir.2KG347600 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 67851598-67861597 Panicum virgatum
Pavir.2KG347600 10.0kb downstream 10.0kb downstream 13576 true Chr02K: 67838022-67851597 Panicum virgatum
Pavir.2KG347600 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 67838022-67848021 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
122183122 5267 Panicoideae View MSA
124571949 5269 Grass View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain