Gene : Thecc1EG030615 T. cacao v1.1
Defline:  (1 of 7) PTHR13301//PTHR13301:SF60 - X-BOX TRANSCRIPTION FACTOR-RELATED // CELLULOSE SYNTHASE-LIKE PROTEIN E1 Genomic Order:  107
Name:  ? Thecc1EG030615 Secondary Identifier:  ? PAC:27445828
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1001 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030615 0.5kb upstream 0.5kb upstream 3964 true scaffold_7: 549337-553300 Theobroma cacao
Thecc1EG030615 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 549337-549836 Theobroma cacao
Thecc1EG030615 0.5kb downstream 0.5kb downstream 3964 true scaffold_7: 549837-553800 Theobroma cacao
Thecc1EG030615 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 553301-553800 Theobroma cacao
Thecc1EG030615 1.0kb upstream 1.0kb upstream 4464 true scaffold_7: 548837-553300 Theobroma cacao
Thecc1EG030615 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 548837-549836 Theobroma cacao
Thecc1EG030615 1.0kb downstream 1.0kb downstream 4464 true scaffold_7: 549837-554300 Theobroma cacao
Thecc1EG030615 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 553301-554300 Theobroma cacao
Thecc1EG030615 2.0kb upstream 2.0kb upstream 5464 true scaffold_7: 547837-553300 Theobroma cacao
Thecc1EG030615 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 547837-549836 Theobroma cacao
Thecc1EG030615 2.0kb downstream 2.0kb downstream 5464 true scaffold_7: 549837-555300 Theobroma cacao
Thecc1EG030615 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 553301-555300 Theobroma cacao
Thecc1EG030615 5.0kb upstream 5.0kb upstream 8464 true scaffold_7: 544837-553300 Theobroma cacao
Thecc1EG030615 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 544837-549836 Theobroma cacao
Thecc1EG030615 5.0kb downstream 5.0kb downstream 8464 true scaffold_7: 549837-558300 Theobroma cacao
Thecc1EG030615 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 553301-558300 Theobroma cacao
Thecc1EG030615 10.0kb upstream 10.0kb upstream 13464 true scaffold_7: 539837-553300 Theobroma cacao
Thecc1EG030615 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 539837-549836 Theobroma cacao
Thecc1EG030615 10.0kb downstream 10.0kb downstream 13464 true scaffold_7: 549837-563300 Theobroma cacao
Thecc1EG030615 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 553301-563300 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830596 5264 Brassicales-Malvales View MSA
124339465 5266 SBM View MSA
124237130 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain