Gene : Pavir.2KG400000 P. virgatum v4.1
Defline:  (1 of 35) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3398
Name:  ? Pavir.2KG400000 Secondary Identifier:  ? PAC:37567958
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG400000 0.5kb upstream 0.5kb upstream 9544 true Chr02K: 71851585-71861128 Panicum virgatum
Pavir.2KG400000 0.5kb upstream 0.5kb upstream 500 false Chr02K: 71860629-71861128 Panicum virgatum
Pavir.2KG400000 0.5kb downstream 0.5kb downstream 9544 true Chr02K: 71851085-71860628 Panicum virgatum
Pavir.2KG400000 0.5kb downstream 0.5kb downstream 500 false Chr02K: 71851085-71851584 Panicum virgatum
Pavir.2KG400000 1.0kb upstream 1.0kb upstream 10044 true Chr02K: 71851585-71861628 Panicum virgatum
Pavir.2KG400000 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 71860629-71861628 Panicum virgatum
Pavir.2KG400000 1.0kb downstream 1.0kb downstream 10044 true Chr02K: 71850585-71860628 Panicum virgatum
Pavir.2KG400000 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 71850585-71851584 Panicum virgatum
Pavir.2KG400000 2.0kb upstream 2.0kb upstream 11044 true Chr02K: 71851585-71862628 Panicum virgatum
Pavir.2KG400000 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 71860629-71862628 Panicum virgatum
Pavir.2KG400000 2.0kb downstream 2.0kb downstream 11044 true Chr02K: 71849585-71860628 Panicum virgatum
Pavir.2KG400000 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 71849585-71851584 Panicum virgatum
Pavir.2KG400000 5.0kb upstream 5.0kb upstream 14044 true Chr02K: 71851585-71865628 Panicum virgatum
Pavir.2KG400000 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 71860629-71865628 Panicum virgatum
Pavir.2KG400000 5.0kb downstream 5.0kb downstream 14044 true Chr02K: 71846585-71860628 Panicum virgatum
Pavir.2KG400000 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 71846585-71851584 Panicum virgatum
Pavir.2KG400000 10.0kb upstream 10.0kb upstream 19044 true Chr02K: 71851585-71870628 Panicum virgatum
Pavir.2KG400000 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 71860629-71870628 Panicum virgatum
Pavir.2KG400000 10.0kb downstream 10.0kb downstream 19044 true Chr02K: 71841585-71860628 Panicum virgatum
Pavir.2KG400000 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 71841585-71851584 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122077406 5267 Panicoideae Singleton cluster - no MSA
124582844 5269 Grass View MSA
122047708 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346208 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain