Gene : Pavir.2KG390500 P. virgatum v4.1
Defline:  (1 of 2) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Genomic Order:  3707
Name:  ? Pavir.2KG390500 Secondary Identifier:  ? PAC:37566006
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum POLYAMINSYN3-PWY Panicum virgatum pathologic  
Pvirgatum PWY-46 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG390500 0.5kb upstream 0.5kb upstream 2404 true Chr02K: 75690349-75692752 Panicum virgatum
Pavir.2KG390500 0.5kb upstream 0.5kb upstream 500 false Chr02K: 75692253-75692752 Panicum virgatum
Pavir.2KG390500 0.5kb downstream 0.5kb downstream 2404 true Chr02K: 75689849-75692252 Panicum virgatum
Pavir.2KG390500 0.5kb downstream 0.5kb downstream 500 false Chr02K: 75689849-75690348 Panicum virgatum
Pavir.2KG390500 1.0kb upstream 1.0kb upstream 2904 true Chr02K: 75690349-75693252 Panicum virgatum
Pavir.2KG390500 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 75692253-75693252 Panicum virgatum
Pavir.2KG390500 1.0kb downstream 1.0kb downstream 2904 true Chr02K: 75689349-75692252 Panicum virgatum
Pavir.2KG390500 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 75689349-75690348 Panicum virgatum
Pavir.2KG390500 2.0kb upstream 2.0kb upstream 3904 true Chr02K: 75690349-75694252 Panicum virgatum
Pavir.2KG390500 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 75692253-75694252 Panicum virgatum
Pavir.2KG390500 2.0kb downstream 2.0kb downstream 3904 true Chr02K: 75688349-75692252 Panicum virgatum
Pavir.2KG390500 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 75688349-75690348 Panicum virgatum
Pavir.2KG390500 5.0kb upstream 5.0kb upstream 6904 true Chr02K: 75690349-75697252 Panicum virgatum
Pavir.2KG390500 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 75692253-75697252 Panicum virgatum
Pavir.2KG390500 5.0kb downstream 5.0kb downstream 6904 true Chr02K: 75685349-75692252 Panicum virgatum
Pavir.2KG390500 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 75685349-75690348 Panicum virgatum
Pavir.2KG390500 10.0kb upstream 10.0kb upstream 11904 true Chr02K: 75690349-75702252 Panicum virgatum
Pavir.2KG390500 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 75692253-75702252 Panicum virgatum
Pavir.2KG390500 10.0kb downstream 10.0kb downstream 11904 true Chr02K: 75680349-75692252 Panicum virgatum
Pavir.2KG390500 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 75680349-75690348 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175244 5267 Panicoideae View MSA
124578154 5269 Grass View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain