Gene : Pavir.2KG397600 P. virgatum v4.1
Defline:  (1 of 5) K01873 - valyl-tRNA synthetase (VARS, valS) Genomic Order:  3773
Name:  ? Pavir.2KG397600 Secondary Identifier:  ? PAC:37567700
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG397600 0.5kb upstream 0.5kb upstream 8212 true Chr02K: 76287408-76295619 Panicum virgatum
Pavir.2KG397600 0.5kb upstream 0.5kb upstream 500 false Chr02K: 76287408-76287907 Panicum virgatum
Pavir.2KG397600 0.5kb downstream 0.5kb downstream 8212 true Chr02K: 76287908-76296119 Panicum virgatum
Pavir.2KG397600 0.5kb downstream 0.5kb downstream 500 false Chr02K: 76295620-76296119 Panicum virgatum
Pavir.2KG397600 1.0kb upstream 1.0kb upstream 8712 true Chr02K: 76286908-76295619 Panicum virgatum
Pavir.2KG397600 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 76286908-76287907 Panicum virgatum
Pavir.2KG397600 1.0kb downstream 1.0kb downstream 8712 true Chr02K: 76287908-76296619 Panicum virgatum
Pavir.2KG397600 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 76295620-76296619 Panicum virgatum
Pavir.2KG397600 2.0kb upstream 2.0kb upstream 9712 true Chr02K: 76285908-76295619 Panicum virgatum
Pavir.2KG397600 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 76285908-76287907 Panicum virgatum
Pavir.2KG397600 2.0kb downstream 2.0kb downstream 9712 true Chr02K: 76287908-76297619 Panicum virgatum
Pavir.2KG397600 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 76295620-76297619 Panicum virgatum
Pavir.2KG397600 5.0kb upstream 5.0kb upstream 12712 true Chr02K: 76282908-76295619 Panicum virgatum
Pavir.2KG397600 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 76282908-76287907 Panicum virgatum
Pavir.2KG397600 5.0kb downstream 5.0kb downstream 12712 true Chr02K: 76287908-76300619 Panicum virgatum
Pavir.2KG397600 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 76295620-76300619 Panicum virgatum
Pavir.2KG397600 10.0kb upstream 10.0kb upstream 17712 true Chr02K: 76277908-76295619 Panicum virgatum
Pavir.2KG397600 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 76277908-76287907 Panicum virgatum
Pavir.2KG397600 10.0kb downstream 10.0kb downstream 17712 true Chr02K: 76287908-76305619 Panicum virgatum
Pavir.2KG397600 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 76295620-76305619 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191584 5267 Panicoideae View MSA
124590006 5269 Grass View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain