Gene : Thecc1EG030814 T. cacao v1.1
Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  289
Name:  ? Thecc1EG030814 Secondary Identifier:  ? PAC:27446235
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-162 Theobroma cacao pathologic  
Tcacao PWY-5686 Theobroma cacao pathologic  
Tcacao PWY-7211 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030814 0.5kb upstream 0.5kb upstream 3567 true scaffold_7: 1484185-1487751 Theobroma cacao
Thecc1EG030814 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1487252-1487751 Theobroma cacao
Thecc1EG030814 0.5kb downstream 0.5kb downstream 3567 true scaffold_7: 1483685-1487251 Theobroma cacao
Thecc1EG030814 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1483685-1484184 Theobroma cacao
Thecc1EG030814 1.0kb upstream 1.0kb upstream 4067 true scaffold_7: 1484185-1488251 Theobroma cacao
Thecc1EG030814 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1487252-1488251 Theobroma cacao
Thecc1EG030814 1.0kb downstream 1.0kb downstream 4067 true scaffold_7: 1483185-1487251 Theobroma cacao
Thecc1EG030814 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1483185-1484184 Theobroma cacao
Thecc1EG030814 2.0kb upstream 2.0kb upstream 5067 true scaffold_7: 1484185-1489251 Theobroma cacao
Thecc1EG030814 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1487252-1489251 Theobroma cacao
Thecc1EG030814 2.0kb downstream 2.0kb downstream 5067 true scaffold_7: 1482185-1487251 Theobroma cacao
Thecc1EG030814 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1482185-1484184 Theobroma cacao
Thecc1EG030814 5.0kb upstream 5.0kb upstream 8067 true scaffold_7: 1484185-1492251 Theobroma cacao
Thecc1EG030814 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1487252-1492251 Theobroma cacao
Thecc1EG030814 5.0kb downstream 5.0kb downstream 8067 true scaffold_7: 1479185-1487251 Theobroma cacao
Thecc1EG030814 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1479185-1484184 Theobroma cacao
Thecc1EG030814 10.0kb upstream 10.0kb upstream 13067 true scaffold_7: 1484185-1497251 Theobroma cacao
Thecc1EG030814 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1487252-1497251 Theobroma cacao
Thecc1EG030814 10.0kb downstream 10.0kb downstream 13067 true scaffold_7: 1474185-1487251 Theobroma cacao
Thecc1EG030814 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1474185-1484184 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834078 5264 Brassicales-Malvales View MSA
124341674 5266 SBM View MSA
124240648 5268 Malvidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain