Gene : Thecc1EG030822 T. cacao v1.1
Defline:  (1 of 26) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  297
Name:  ? Thecc1EG030822 Secondary Identifier:  ? PAC:27445592
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030822 0.5kb upstream 0.5kb upstream 1397 true scaffold_7: 1514542-1515938 Theobroma cacao
Thecc1EG030822 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1514542-1515041 Theobroma cacao
Thecc1EG030822 0.5kb downstream 0.5kb downstream 1397 true scaffold_7: 1515042-1516438 Theobroma cacao
Thecc1EG030822 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1515939-1516438 Theobroma cacao
Thecc1EG030822 1.0kb upstream 1.0kb upstream 1897 true scaffold_7: 1514042-1515938 Theobroma cacao
Thecc1EG030822 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1514042-1515041 Theobroma cacao
Thecc1EG030822 1.0kb downstream 1.0kb downstream 1897 true scaffold_7: 1515042-1516938 Theobroma cacao
Thecc1EG030822 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1515939-1516938 Theobroma cacao
Thecc1EG030822 2.0kb upstream 2.0kb upstream 2897 true scaffold_7: 1513042-1515938 Theobroma cacao
Thecc1EG030822 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1513042-1515041 Theobroma cacao
Thecc1EG030822 2.0kb downstream 2.0kb downstream 2897 true scaffold_7: 1515042-1517938 Theobroma cacao
Thecc1EG030822 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1515939-1517938 Theobroma cacao
Thecc1EG030822 5.0kb upstream 5.0kb upstream 5897 true scaffold_7: 1510042-1515938 Theobroma cacao
Thecc1EG030822 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1510042-1515041 Theobroma cacao
Thecc1EG030822 5.0kb downstream 5.0kb downstream 5897 true scaffold_7: 1515042-1520938 Theobroma cacao
Thecc1EG030822 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1515939-1520938 Theobroma cacao
Thecc1EG030822 10.0kb upstream 10.0kb upstream 10897 true scaffold_7: 1505042-1515938 Theobroma cacao
Thecc1EG030822 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1505042-1515041 Theobroma cacao
Thecc1EG030822 10.0kb downstream 10.0kb downstream 10897 true scaffold_7: 1515042-1525938 Theobroma cacao
Thecc1EG030822 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1515939-1525938 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825136 5264 Brassicales-Malvales View MSA
124347823 5266 SBM View MSA
124245667 5268 Malvidae View MSA
124070125 5270 Rosid View MSA
123742485 5271 Pentapetalae View MSA
122795207 5272 Eudicot View MSA
122049562 5273 Angiosperm View MSA
121311476 5274 Embryophyte View MSA
123348769 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain