Gene : Thecc1EG030800 T. cacao v1.1
Defline:  (1 of 1) PF01535//PF12056//PF13041//PF14432 - PPR repeat (PPR) // Protein of unknown function (DUF3537) (DUF3537) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  276
Name:  ? Thecc1EG030800 Secondary Identifier:  ? PAC:27446391
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030800 0.5kb upstream 0.5kb upstream 5229 true scaffold_7: 1435697-1440925 Theobroma cacao
Thecc1EG030800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1440426-1440925 Theobroma cacao
Thecc1EG030800 0.5kb downstream 0.5kb downstream 5229 true scaffold_7: 1435197-1440425 Theobroma cacao
Thecc1EG030800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1435197-1435696 Theobroma cacao
Thecc1EG030800 1.0kb upstream 1.0kb upstream 5729 true scaffold_7: 1435697-1441425 Theobroma cacao
Thecc1EG030800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1440426-1441425 Theobroma cacao
Thecc1EG030800 1.0kb downstream 1.0kb downstream 5729 true scaffold_7: 1434697-1440425 Theobroma cacao
Thecc1EG030800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1434697-1435696 Theobroma cacao
Thecc1EG030800 2.0kb upstream 2.0kb upstream 6729 true scaffold_7: 1435697-1442425 Theobroma cacao
Thecc1EG030800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1440426-1442425 Theobroma cacao
Thecc1EG030800 2.0kb downstream 2.0kb downstream 6729 true scaffold_7: 1433697-1440425 Theobroma cacao
Thecc1EG030800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1433697-1435696 Theobroma cacao
Thecc1EG030800 5.0kb upstream 5.0kb upstream 9729 true scaffold_7: 1435697-1445425 Theobroma cacao
Thecc1EG030800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1440426-1445425 Theobroma cacao
Thecc1EG030800 5.0kb downstream 5.0kb downstream 9729 true scaffold_7: 1430697-1440425 Theobroma cacao
Thecc1EG030800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1430697-1435696 Theobroma cacao
Thecc1EG030800 10.0kb upstream 10.0kb upstream 14729 true scaffold_7: 1435697-1450425 Theobroma cacao
Thecc1EG030800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1440426-1450425 Theobroma cacao
Thecc1EG030800 10.0kb downstream 10.0kb downstream 14729 true scaffold_7: 1425697-1440425 Theobroma cacao
Thecc1EG030800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1425697-1435696 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826622 5264 Brassicales-Malvales View MSA
124349387 5266 SBM View MSA
124246400 5268 Malvidae View MSA
124071854 5270 Rosid View MSA
123744746 5271 Pentapetalae View MSA
122794994 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain