Gene : Thecc1EG030699 T. cacao v1.1
Defline:  (1 of 294) PF00560 - Leucine Rich Repeat (LRR_1) Genomic Order:  182
Name:  ? Thecc1EG030699 Secondary Identifier:  ? PAC:27445900
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030699 0.5kb upstream 0.5kb upstream 1673 true scaffold_7: 939744-941416 Theobroma cacao
Thecc1EG030699 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 939744-940243 Theobroma cacao
Thecc1EG030699 0.5kb downstream 0.5kb downstream 1673 true scaffold_7: 940244-941916 Theobroma cacao
Thecc1EG030699 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 941417-941916 Theobroma cacao
Thecc1EG030699 1.0kb upstream 1.0kb upstream 2173 true scaffold_7: 939244-941416 Theobroma cacao
Thecc1EG030699 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 939244-940243 Theobroma cacao
Thecc1EG030699 1.0kb downstream 1.0kb downstream 2173 true scaffold_7: 940244-942416 Theobroma cacao
Thecc1EG030699 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 941417-942416 Theobroma cacao
Thecc1EG030699 2.0kb upstream 2.0kb upstream 3173 true scaffold_7: 938244-941416 Theobroma cacao
Thecc1EG030699 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 938244-940243 Theobroma cacao
Thecc1EG030699 2.0kb downstream 2.0kb downstream 3173 true scaffold_7: 940244-943416 Theobroma cacao
Thecc1EG030699 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 941417-943416 Theobroma cacao
Thecc1EG030699 5.0kb upstream 5.0kb upstream 6173 true scaffold_7: 935244-941416 Theobroma cacao
Thecc1EG030699 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 935244-940243 Theobroma cacao
Thecc1EG030699 5.0kb downstream 5.0kb downstream 6173 true scaffold_7: 940244-946416 Theobroma cacao
Thecc1EG030699 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 941417-946416 Theobroma cacao
Thecc1EG030699 10.0kb upstream 10.0kb upstream 11173 true scaffold_7: 930244-941416 Theobroma cacao
Thecc1EG030699 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 930244-940243 Theobroma cacao
Thecc1EG030699 10.0kb downstream 10.0kb downstream 11173 true scaffold_7: 940244-951416 Theobroma cacao
Thecc1EG030699 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 941417-951416 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837111 5264 Brassicales-Malvales View MSA
124347409 5266 SBM View MSA
124254705 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain