Gene : Thecc1EG030696 T. cacao v1.1
Defline:  (1 of 294) PF00560 - Leucine Rich Repeat (LRR_1) Genomic Order:  180
Name:  ? Thecc1EG030696 Secondary Identifier:  ? PAC:27445447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030696 0.5kb upstream 0.5kb upstream 1570 true scaffold_7: 926517-928086 Theobroma cacao
Thecc1EG030696 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 926517-927016 Theobroma cacao
Thecc1EG030696 0.5kb downstream 0.5kb downstream 1570 true scaffold_7: 927017-928586 Theobroma cacao
Thecc1EG030696 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 928087-928586 Theobroma cacao
Thecc1EG030696 1.0kb upstream 1.0kb upstream 2070 true scaffold_7: 926017-928086 Theobroma cacao
Thecc1EG030696 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 926017-927016 Theobroma cacao
Thecc1EG030696 1.0kb downstream 1.0kb downstream 2070 true scaffold_7: 927017-929086 Theobroma cacao
Thecc1EG030696 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 928087-929086 Theobroma cacao
Thecc1EG030696 2.0kb upstream 2.0kb upstream 3070 true scaffold_7: 925017-928086 Theobroma cacao
Thecc1EG030696 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 925017-927016 Theobroma cacao
Thecc1EG030696 2.0kb downstream 2.0kb downstream 3070 true scaffold_7: 927017-930086 Theobroma cacao
Thecc1EG030696 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 928087-930086 Theobroma cacao
Thecc1EG030696 5.0kb upstream 5.0kb upstream 6070 true scaffold_7: 922017-928086 Theobroma cacao
Thecc1EG030696 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 922017-927016 Theobroma cacao
Thecc1EG030696 5.0kb downstream 5.0kb downstream 6070 true scaffold_7: 927017-933086 Theobroma cacao
Thecc1EG030696 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 928087-933086 Theobroma cacao
Thecc1EG030696 10.0kb upstream 10.0kb upstream 11070 true scaffold_7: 917017-928086 Theobroma cacao
Thecc1EG030696 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 917017-927016 Theobroma cacao
Thecc1EG030696 10.0kb downstream 10.0kb downstream 11070 true scaffold_7: 927017-938086 Theobroma cacao
Thecc1EG030696 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 928087-938086 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837111 5264 Brassicales-Malvales View MSA
124347409 5266 SBM View MSA
124254705 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain