Gene : Thecc1EG030673 T. cacao v1.1
Defline:  (1 of 2) PTHR23416//PTHR23416:SF56 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  160
Name:  ? Thecc1EG030673 Secondary Identifier:  ? PAC:27444458
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CYSTSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-6936 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030673 0.5kb upstream 0.5kb upstream 2315 true scaffold_7: 781121-783435 Theobroma cacao
Thecc1EG030673 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 781121-781620 Theobroma cacao
Thecc1EG030673 0.5kb downstream 0.5kb downstream 2315 true scaffold_7: 781621-783935 Theobroma cacao
Thecc1EG030673 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 783436-783935 Theobroma cacao
Thecc1EG030673 1.0kb upstream 1.0kb upstream 2815 true scaffold_7: 780621-783435 Theobroma cacao
Thecc1EG030673 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 780621-781620 Theobroma cacao
Thecc1EG030673 1.0kb downstream 1.0kb downstream 2815 true scaffold_7: 781621-784435 Theobroma cacao
Thecc1EG030673 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 783436-784435 Theobroma cacao
Thecc1EG030673 2.0kb upstream 2.0kb upstream 3815 true scaffold_7: 779621-783435 Theobroma cacao
Thecc1EG030673 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 779621-781620 Theobroma cacao
Thecc1EG030673 2.0kb downstream 2.0kb downstream 3815 true scaffold_7: 781621-785435 Theobroma cacao
Thecc1EG030673 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 783436-785435 Theobroma cacao
Thecc1EG030673 5.0kb upstream 5.0kb upstream 6815 true scaffold_7: 776621-783435 Theobroma cacao
Thecc1EG030673 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 776621-781620 Theobroma cacao
Thecc1EG030673 5.0kb downstream 5.0kb downstream 6815 true scaffold_7: 781621-788435 Theobroma cacao
Thecc1EG030673 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 783436-788435 Theobroma cacao
Thecc1EG030673 10.0kb upstream 10.0kb upstream 11815 true scaffold_7: 771621-783435 Theobroma cacao
Thecc1EG030673 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 771621-781620 Theobroma cacao
Thecc1EG030673 10.0kb downstream 10.0kb downstream 11815 true scaffold_7: 781621-793435 Theobroma cacao
Thecc1EG030673 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 783436-793435 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835018 5264 Brassicales-Malvales View MSA
124338786 5266 SBM View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain