Gene : Thecc1EG030961 T. cacao v1.1
Defline:  (1 of 7) PTHR16007//PTHR16007:SF18 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // SUBFAMILY NOT NAMED Genomic Order:  419
Name:  ? Thecc1EG030961 Secondary Identifier:  ? PAC:27444141
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030961 0.5kb upstream 0.5kb upstream 4082 true scaffold_7: 2250099-2254180 Theobroma cacao
Thecc1EG030961 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2250099-2250598 Theobroma cacao
Thecc1EG030961 0.5kb downstream 0.5kb downstream 4082 true scaffold_7: 2250599-2254680 Theobroma cacao
Thecc1EG030961 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2254181-2254680 Theobroma cacao
Thecc1EG030961 1.0kb upstream 1.0kb upstream 4582 true scaffold_7: 2249599-2254180 Theobroma cacao
Thecc1EG030961 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2249599-2250598 Theobroma cacao
Thecc1EG030961 1.0kb downstream 1.0kb downstream 4582 true scaffold_7: 2250599-2255180 Theobroma cacao
Thecc1EG030961 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2254181-2255180 Theobroma cacao
Thecc1EG030961 2.0kb upstream 2.0kb upstream 5582 true scaffold_7: 2248599-2254180 Theobroma cacao
Thecc1EG030961 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2248599-2250598 Theobroma cacao
Thecc1EG030961 2.0kb downstream 2.0kb downstream 5582 true scaffold_7: 2250599-2256180 Theobroma cacao
Thecc1EG030961 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2254181-2256180 Theobroma cacao
Thecc1EG030961 5.0kb upstream 5.0kb upstream 8582 true scaffold_7: 2245599-2254180 Theobroma cacao
Thecc1EG030961 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2245599-2250598 Theobroma cacao
Thecc1EG030961 5.0kb downstream 5.0kb downstream 8582 true scaffold_7: 2250599-2259180 Theobroma cacao
Thecc1EG030961 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2254181-2259180 Theobroma cacao
Thecc1EG030961 10.0kb upstream 10.0kb upstream 13582 true scaffold_7: 2240599-2254180 Theobroma cacao
Thecc1EG030961 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2240599-2250598 Theobroma cacao
Thecc1EG030961 10.0kb downstream 10.0kb downstream 13582 true scaffold_7: 2250599-2264180 Theobroma cacao
Thecc1EG030961 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2254181-2264180 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027649 5273 Angiosperm View MSA
123821397 5264 Brassicales-Malvales Singleton cluster - no MSA
124317571 5266 SBM Singleton cluster - no MSA
124166290 5268 Malvidae Singleton cluster - no MSA
124071323 5270 Rosid View MSA
123752946 5271 Pentapetalae View MSA
122774876 5272 Eudicot View MSA
121297275 5274 Embryophyte View MSA
123335348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain