Gene : Thecc1EG030947 T. cacao v1.1

Defline:  (1 of 1) PTHR12668//PTHR12668:SF0 - TRANSMEMBRANE PROTEIN 14, 15 // UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  406
Name:  ? Thecc1EG030947 Secondary Identifier:  ? PAC:27444339

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030947 0.5kb upstream 0.5kb upstream 2437 true scaffold_7: 2210896-2213332 Theobroma cacao
Thecc1EG030947 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2210896-2211395 Theobroma cacao
Thecc1EG030947 0.5kb downstream 0.5kb downstream 2437 true scaffold_7: 2211396-2213832 Theobroma cacao
Thecc1EG030947 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2213333-2213832 Theobroma cacao
Thecc1EG030947 1.0kb upstream 1.0kb upstream 2937 true scaffold_7: 2210396-2213332 Theobroma cacao
Thecc1EG030947 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2210396-2211395 Theobroma cacao
Thecc1EG030947 1.0kb downstream 1.0kb downstream 2937 true scaffold_7: 2211396-2214332 Theobroma cacao
Thecc1EG030947 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2213333-2214332 Theobroma cacao
Thecc1EG030947 2.0kb upstream 2.0kb upstream 3937 true scaffold_7: 2209396-2213332 Theobroma cacao
Thecc1EG030947 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2209396-2211395 Theobroma cacao
Thecc1EG030947 2.0kb downstream 2.0kb downstream 3937 true scaffold_7: 2211396-2215332 Theobroma cacao
Thecc1EG030947 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2213333-2215332 Theobroma cacao
Thecc1EG030947 5.0kb upstream 5.0kb upstream 6937 true scaffold_7: 2206396-2213332 Theobroma cacao
Thecc1EG030947 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2206396-2211395 Theobroma cacao
Thecc1EG030947 5.0kb downstream 5.0kb downstream 6937 true scaffold_7: 2211396-2218332 Theobroma cacao
Thecc1EG030947 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2213333-2218332 Theobroma cacao
Thecc1EG030947 10.0kb upstream 10.0kb upstream 11937 true scaffold_7: 2201396-2213332 Theobroma cacao
Thecc1EG030947 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2201396-2211395 Theobroma cacao
Thecc1EG030947 10.0kb downstream 10.0kb downstream 11937 true scaffold_7: 2211396-2223332 Theobroma cacao
Thecc1EG030947 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2213333-2223332 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840061 5264 Brassicales-Malvales View MSA
124344011 5266 SBM View MSA
124242311 5268 Malvidae View MSA
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain