Gene : Thecc1EG030889 T. cacao v1.1
Defline:  Expression of the gene is downregulated in the presence of paraquat Genomic Order:  358
Name:  ? Thecc1EG030889 Secondary Identifier:  ? PAC:27444281
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030889 0.5kb upstream 0.5kb upstream 1107 true scaffold_7: 1826493-1827599 Theobroma cacao
Thecc1EG030889 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1826493-1826992 Theobroma cacao
Thecc1EG030889 0.5kb downstream 0.5kb downstream 1107 true scaffold_7: 1826993-1828099 Theobroma cacao
Thecc1EG030889 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1827600-1828099 Theobroma cacao
Thecc1EG030889 1.0kb upstream 1.0kb upstream 1607 true scaffold_7: 1825993-1827599 Theobroma cacao
Thecc1EG030889 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1825993-1826992 Theobroma cacao
Thecc1EG030889 1.0kb downstream 1.0kb downstream 1607 true scaffold_7: 1826993-1828599 Theobroma cacao
Thecc1EG030889 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1827600-1828599 Theobroma cacao
Thecc1EG030889 2.0kb upstream 2.0kb upstream 2607 true scaffold_7: 1824993-1827599 Theobroma cacao
Thecc1EG030889 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1824993-1826992 Theobroma cacao
Thecc1EG030889 2.0kb downstream 2.0kb downstream 2607 true scaffold_7: 1826993-1829599 Theobroma cacao
Thecc1EG030889 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1827600-1829599 Theobroma cacao
Thecc1EG030889 5.0kb upstream 5.0kb upstream 5607 true scaffold_7: 1821993-1827599 Theobroma cacao
Thecc1EG030889 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1821993-1826992 Theobroma cacao
Thecc1EG030889 5.0kb downstream 5.0kb downstream 5607 true scaffold_7: 1826993-1832599 Theobroma cacao
Thecc1EG030889 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1827600-1832599 Theobroma cacao
Thecc1EG030889 10.0kb upstream 10.0kb upstream 10607 true scaffold_7: 1816993-1827599 Theobroma cacao
Thecc1EG030889 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1816993-1826992 Theobroma cacao
Thecc1EG030889 10.0kb downstream 10.0kb downstream 10607 true scaffold_7: 1826993-1837599 Theobroma cacao
Thecc1EG030889 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1827600-1837599 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828751 5264 Brassicales-Malvales View MSA
124321554 5266 SBM View MSA
124250030 5268 Malvidae View MSA
124068820 5270 Rosid View MSA
123742955 5271 Pentapetalae View MSA
122795546 5272 Eudicot View MSA
122045130 5273 Angiosperm View MSA
121310402 5274 Embryophyte View MSA
123347893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain