Gene : Thecc1EG030866 T. cacao v1.1
Defline:  (1 of 5) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  336
Name:  ? Thecc1EG030866 Secondary Identifier:  ? PAC:27444682
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYOXYLATE-BYPASS Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5690 Theobroma cacao pathologic  
Tcacao PWY-6549 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030866 0.5kb upstream 0.5kb upstream 6510 true scaffold_7: 1720328-1726837 Theobroma cacao
Thecc1EG030866 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1720328-1720827 Theobroma cacao
Thecc1EG030866 0.5kb downstream 0.5kb downstream 6510 true scaffold_7: 1720828-1727337 Theobroma cacao
Thecc1EG030866 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1726838-1727337 Theobroma cacao
Thecc1EG030866 1.0kb upstream 1.0kb upstream 7010 true scaffold_7: 1719828-1726837 Theobroma cacao
Thecc1EG030866 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1719828-1720827 Theobroma cacao
Thecc1EG030866 1.0kb downstream 1.0kb downstream 7010 true scaffold_7: 1720828-1727837 Theobroma cacao
Thecc1EG030866 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1726838-1727837 Theobroma cacao
Thecc1EG030866 2.0kb upstream 2.0kb upstream 8010 true scaffold_7: 1718828-1726837 Theobroma cacao
Thecc1EG030866 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1718828-1720827 Theobroma cacao
Thecc1EG030866 2.0kb downstream 2.0kb downstream 8010 true scaffold_7: 1720828-1728837 Theobroma cacao
Thecc1EG030866 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1726838-1728837 Theobroma cacao
Thecc1EG030866 5.0kb upstream 5.0kb upstream 11010 true scaffold_7: 1715828-1726837 Theobroma cacao
Thecc1EG030866 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1715828-1720827 Theobroma cacao
Thecc1EG030866 5.0kb downstream 5.0kb downstream 11010 true scaffold_7: 1720828-1731837 Theobroma cacao
Thecc1EG030866 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1726838-1731837 Theobroma cacao
Thecc1EG030866 10.0kb upstream 10.0kb upstream 16010 true scaffold_7: 1710828-1726837 Theobroma cacao
Thecc1EG030866 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1710828-1720827 Theobroma cacao
Thecc1EG030866 10.0kb downstream 10.0kb downstream 16010 true scaffold_7: 1720828-1736837 Theobroma cacao
Thecc1EG030866 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1726838-1736837 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840370 5264 Brassicales-Malvales View MSA
124350117 5266 SBM View MSA
124253803 5268 Malvidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain