Gene : Thecc1EG030869 T. cacao v1.1
Defline:  (1 of 5) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  339
Name:  ? Thecc1EG030869 Secondary Identifier:  ? PAC:27446510
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYOXYLATE-BYPASS Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5690 Theobroma cacao pathologic  
Tcacao PWY-6549 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030869 0.5kb upstream 0.5kb upstream 7662 true scaffold_7: 1733314-1740975 Theobroma cacao
Thecc1EG030869 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1733314-1733813 Theobroma cacao
Thecc1EG030869 0.5kb downstream 0.5kb downstream 7662 true scaffold_7: 1733814-1741475 Theobroma cacao
Thecc1EG030869 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1740976-1741475 Theobroma cacao
Thecc1EG030869 1.0kb upstream 1.0kb upstream 8162 true scaffold_7: 1732814-1740975 Theobroma cacao
Thecc1EG030869 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1732814-1733813 Theobroma cacao
Thecc1EG030869 1.0kb downstream 1.0kb downstream 8162 true scaffold_7: 1733814-1741975 Theobroma cacao
Thecc1EG030869 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1740976-1741975 Theobroma cacao
Thecc1EG030869 2.0kb upstream 2.0kb upstream 9162 true scaffold_7: 1731814-1740975 Theobroma cacao
Thecc1EG030869 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1731814-1733813 Theobroma cacao
Thecc1EG030869 2.0kb downstream 2.0kb downstream 9162 true scaffold_7: 1733814-1742975 Theobroma cacao
Thecc1EG030869 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1740976-1742975 Theobroma cacao
Thecc1EG030869 5.0kb upstream 5.0kb upstream 12162 true scaffold_7: 1728814-1740975 Theobroma cacao
Thecc1EG030869 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1728814-1733813 Theobroma cacao
Thecc1EG030869 5.0kb downstream 5.0kb downstream 12162 true scaffold_7: 1733814-1745975 Theobroma cacao
Thecc1EG030869 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1740976-1745975 Theobroma cacao
Thecc1EG030869 10.0kb upstream 10.0kb upstream 17162 true scaffold_7: 1723814-1740975 Theobroma cacao
Thecc1EG030869 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1723814-1733813 Theobroma cacao
Thecc1EG030869 10.0kb downstream 10.0kb downstream 17162 true scaffold_7: 1733814-1750975 Theobroma cacao
Thecc1EG030869 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1740976-1750975 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029305 5273 Angiosperm View MSA
123827287 5264 Brassicales-Malvales View MSA
124321426 5266 SBM View MSA
124169021 5268 Malvidae View MSA
123892225 5270 Rosid View MSA
123757979 5271 Pentapetalae View MSA
122778980 5272 Eudicot View MSA
121298650 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain