Gene : Thecc1EG030844 T. cacao v1.1
Defline:  (1 of 1) K08741 - DNA mismatch repair protein MSH5 (MSH5) Genomic Order:  318
Name:  ? Thecc1EG030844 Secondary Identifier:  ? PAC:27445484
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030844 0.5kb upstream 0.5kb upstream 12938 true scaffold_7: 1616670-1629607 Theobroma cacao
Thecc1EG030844 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1616670-1617169 Theobroma cacao
Thecc1EG030844 0.5kb downstream 0.5kb downstream 12938 true scaffold_7: 1617170-1630107 Theobroma cacao
Thecc1EG030844 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1629608-1630107 Theobroma cacao
Thecc1EG030844 1.0kb upstream 1.0kb upstream 13438 true scaffold_7: 1616170-1629607 Theobroma cacao
Thecc1EG030844 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1616170-1617169 Theobroma cacao
Thecc1EG030844 1.0kb downstream 1.0kb downstream 13438 true scaffold_7: 1617170-1630607 Theobroma cacao
Thecc1EG030844 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1629608-1630607 Theobroma cacao
Thecc1EG030844 2.0kb upstream 2.0kb upstream 14438 true scaffold_7: 1615170-1629607 Theobroma cacao
Thecc1EG030844 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1615170-1617169 Theobroma cacao
Thecc1EG030844 2.0kb downstream 2.0kb downstream 14438 true scaffold_7: 1617170-1631607 Theobroma cacao
Thecc1EG030844 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1629608-1631607 Theobroma cacao
Thecc1EG030844 5.0kb upstream 5.0kb upstream 17438 true scaffold_7: 1612170-1629607 Theobroma cacao
Thecc1EG030844 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1612170-1617169 Theobroma cacao
Thecc1EG030844 5.0kb downstream 5.0kb downstream 17438 true scaffold_7: 1617170-1634607 Theobroma cacao
Thecc1EG030844 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1629608-1634607 Theobroma cacao
Thecc1EG030844 10.0kb upstream 10.0kb upstream 22438 true scaffold_7: 1607170-1629607 Theobroma cacao
Thecc1EG030844 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1607170-1617169 Theobroma cacao
Thecc1EG030844 10.0kb downstream 10.0kb downstream 22438 true scaffold_7: 1617170-1639607 Theobroma cacao
Thecc1EG030844 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1629608-1639607 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832564 5264 Brassicales-Malvales View MSA
124343631 5266 SBM View MSA
124240377 5268 Malvidae View MSA
124066874 5270 Rosid View MSA
123749181 5271 Pentapetalae View MSA
122792549 5272 Eudicot View MSA
122042085 5273 Angiosperm View MSA
121347991 5274 Embryophyte View MSA
123423769 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain