Gene : Thecc1EG030840 T. cacao v1.1
Defline:  (1 of 2) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  314
Name:  ? Thecc1EG030840 Secondary Identifier:  ? PAC:27446581
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5084 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030840 0.5kb upstream 0.5kb upstream 6082 true scaffold_7: 1600789-1606870 Theobroma cacao
Thecc1EG030840 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1606371-1606870 Theobroma cacao
Thecc1EG030840 0.5kb downstream 0.5kb downstream 6082 true scaffold_7: 1600289-1606370 Theobroma cacao
Thecc1EG030840 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1600289-1600788 Theobroma cacao
Thecc1EG030840 1.0kb upstream 1.0kb upstream 6582 true scaffold_7: 1600789-1607370 Theobroma cacao
Thecc1EG030840 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1606371-1607370 Theobroma cacao
Thecc1EG030840 1.0kb downstream 1.0kb downstream 6582 true scaffold_7: 1599789-1606370 Theobroma cacao
Thecc1EG030840 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1599789-1600788 Theobroma cacao
Thecc1EG030840 2.0kb upstream 2.0kb upstream 7582 true scaffold_7: 1600789-1608370 Theobroma cacao
Thecc1EG030840 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1606371-1608370 Theobroma cacao
Thecc1EG030840 2.0kb downstream 2.0kb downstream 7582 true scaffold_7: 1598789-1606370 Theobroma cacao
Thecc1EG030840 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1598789-1600788 Theobroma cacao
Thecc1EG030840 5.0kb upstream 5.0kb upstream 10582 true scaffold_7: 1600789-1611370 Theobroma cacao
Thecc1EG030840 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1606371-1611370 Theobroma cacao
Thecc1EG030840 5.0kb downstream 5.0kb downstream 10582 true scaffold_7: 1595789-1606370 Theobroma cacao
Thecc1EG030840 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1595789-1600788 Theobroma cacao
Thecc1EG030840 10.0kb upstream 10.0kb upstream 15582 true scaffold_7: 1600789-1616370 Theobroma cacao
Thecc1EG030840 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1606371-1616370 Theobroma cacao
Thecc1EG030840 10.0kb downstream 10.0kb downstream 15582 true scaffold_7: 1590789-1606370 Theobroma cacao
Thecc1EG030840 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1590789-1600788 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838684 5264 Brassicales-Malvales View MSA
124343102 5266 SBM View MSA
124250651 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain