Gene : Thecc1EG031132 T. cacao v1.1

Defline:  (1 of 46) PF03514 - GRAS domain family (GRAS) Genomic Order:  545
Name:  ? Thecc1EG031132 Secondary Identifier:  ? PAC:27444216

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031132 0.5kb upstream 0.5kb upstream 4881 true scaffold_7: 3064936-3069816 Theobroma cacao
Thecc1EG031132 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3064936-3065435 Theobroma cacao
Thecc1EG031132 0.5kb downstream 0.5kb downstream 4881 true scaffold_7: 3065436-3070316 Theobroma cacao
Thecc1EG031132 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3069817-3070316 Theobroma cacao
Thecc1EG031132 1.0kb upstream 1.0kb upstream 5381 true scaffold_7: 3064436-3069816 Theobroma cacao
Thecc1EG031132 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3064436-3065435 Theobroma cacao
Thecc1EG031132 1.0kb downstream 1.0kb downstream 5381 true scaffold_7: 3065436-3070816 Theobroma cacao
Thecc1EG031132 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3069817-3070816 Theobroma cacao
Thecc1EG031132 2.0kb upstream 2.0kb upstream 6381 true scaffold_7: 3063436-3069816 Theobroma cacao
Thecc1EG031132 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3063436-3065435 Theobroma cacao
Thecc1EG031132 2.0kb downstream 2.0kb downstream 6381 true scaffold_7: 3065436-3071816 Theobroma cacao
Thecc1EG031132 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3069817-3071816 Theobroma cacao
Thecc1EG031132 5.0kb upstream 5.0kb upstream 9381 true scaffold_7: 3060436-3069816 Theobroma cacao
Thecc1EG031132 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3060436-3065435 Theobroma cacao
Thecc1EG031132 5.0kb downstream 5.0kb downstream 9381 true scaffold_7: 3065436-3074816 Theobroma cacao
Thecc1EG031132 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3069817-3074816 Theobroma cacao
Thecc1EG031132 10.0kb upstream 10.0kb upstream 14381 true scaffold_7: 3055436-3069816 Theobroma cacao
Thecc1EG031132 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3055436-3065435 Theobroma cacao
Thecc1EG031132 10.0kb downstream 10.0kb downstream 14381 true scaffold_7: 3065436-3079816 Theobroma cacao
Thecc1EG031132 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3069817-3079816 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827089 5264 Brassicales-Malvales View MSA
124349327 5266 SBM View MSA
124246383 5268 Malvidae View MSA
124070191 5270 Rosid View MSA
123743209 5271 Pentapetalae View MSA
122794651 5272 Eudicot View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain