Gene : Thecc1EG031128 T. cacao v1.1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF350 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  542
Name:  ? Thecc1EG031128 Secondary Identifier:  ? PAC:27444632
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY1F-823 Theobroma cacao pathologic  
Tcacao PWY-5152 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031128 0.5kb upstream 0.5kb upstream 3422 true scaffold_7: 3040646-3044067 Theobroma cacao
Thecc1EG031128 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3043568-3044067 Theobroma cacao
Thecc1EG031128 0.5kb downstream 0.5kb downstream 3422 true scaffold_7: 3040146-3043567 Theobroma cacao
Thecc1EG031128 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3040146-3040645 Theobroma cacao
Thecc1EG031128 1.0kb upstream 1.0kb upstream 3922 true scaffold_7: 3040646-3044567 Theobroma cacao
Thecc1EG031128 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3043568-3044567 Theobroma cacao
Thecc1EG031128 1.0kb downstream 1.0kb downstream 3922 true scaffold_7: 3039646-3043567 Theobroma cacao
Thecc1EG031128 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3039646-3040645 Theobroma cacao
Thecc1EG031128 2.0kb upstream 2.0kb upstream 4922 true scaffold_7: 3040646-3045567 Theobroma cacao
Thecc1EG031128 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3043568-3045567 Theobroma cacao
Thecc1EG031128 2.0kb downstream 2.0kb downstream 4922 true scaffold_7: 3038646-3043567 Theobroma cacao
Thecc1EG031128 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3038646-3040645 Theobroma cacao
Thecc1EG031128 5.0kb upstream 5.0kb upstream 7922 true scaffold_7: 3040646-3048567 Theobroma cacao
Thecc1EG031128 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3043568-3048567 Theobroma cacao
Thecc1EG031128 5.0kb downstream 5.0kb downstream 7922 true scaffold_7: 3035646-3043567 Theobroma cacao
Thecc1EG031128 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3035646-3040645 Theobroma cacao
Thecc1EG031128 10.0kb upstream 10.0kb upstream 12922 true scaffold_7: 3040646-3053567 Theobroma cacao
Thecc1EG031128 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3043568-3053567 Theobroma cacao
Thecc1EG031128 10.0kb downstream 10.0kb downstream 12922 true scaffold_7: 3030646-3043567 Theobroma cacao
Thecc1EG031128 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3030646-3040645 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827495 5264 Brassicales-Malvales View MSA
124342409 5266 SBM View MSA
124238292 5268 Malvidae View MSA
124062965 5270 Rosid View MSA
123740862 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain