Gene : Thecc1EG031120 T. cacao v1.1
Defline:  (1 of 1) PTHR33399:SF2 - PSBQ-LIKE PROTEIN 2, CHLOROPLASTIC Genomic Order:  534
Name:  ? Thecc1EG031120 Secondary Identifier:  ? PAC:27445766
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031120 0.5kb upstream 0.5kb upstream 1785 true scaffold_7: 3001110-3002894 Theobroma cacao
Thecc1EG031120 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3001110-3001609 Theobroma cacao
Thecc1EG031120 0.5kb downstream 0.5kb downstream 1785 true scaffold_7: 3001610-3003394 Theobroma cacao
Thecc1EG031120 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3002895-3003394 Theobroma cacao
Thecc1EG031120 1.0kb upstream 1.0kb upstream 2285 true scaffold_7: 3000610-3002894 Theobroma cacao
Thecc1EG031120 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3000610-3001609 Theobroma cacao
Thecc1EG031120 1.0kb downstream 1.0kb downstream 2285 true scaffold_7: 3001610-3003894 Theobroma cacao
Thecc1EG031120 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3002895-3003894 Theobroma cacao
Thecc1EG031120 2.0kb upstream 2.0kb upstream 3285 true scaffold_7: 2999610-3002894 Theobroma cacao
Thecc1EG031120 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2999610-3001609 Theobroma cacao
Thecc1EG031120 2.0kb downstream 2.0kb downstream 3285 true scaffold_7: 3001610-3004894 Theobroma cacao
Thecc1EG031120 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3002895-3004894 Theobroma cacao
Thecc1EG031120 5.0kb upstream 5.0kb upstream 6285 true scaffold_7: 2996610-3002894 Theobroma cacao
Thecc1EG031120 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2996610-3001609 Theobroma cacao
Thecc1EG031120 5.0kb downstream 5.0kb downstream 6285 true scaffold_7: 3001610-3007894 Theobroma cacao
Thecc1EG031120 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3002895-3007894 Theobroma cacao
Thecc1EG031120 10.0kb upstream 10.0kb upstream 11285 true scaffold_7: 2991610-3002894 Theobroma cacao
Thecc1EG031120 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2991610-3001609 Theobroma cacao
Thecc1EG031120 10.0kb downstream 10.0kb downstream 11285 true scaffold_7: 3001610-3012894 Theobroma cacao
Thecc1EG031120 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3002895-3012894 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833202 5264 Brassicales-Malvales View MSA
124339811 5266 SBM View MSA
124240639 5268 Malvidae View MSA
124061827 5270 Rosid View MSA
123739872 5271 Pentapetalae View MSA
122789340 5272 Eudicot View MSA
122046356 5273 Angiosperm View MSA
121310593 5274 Embryophyte View MSA
123348038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain