Gene : Thecc1EG031426 T. cacao v1.1
Defline:  (1 of 427) PF01535 - PPR repeat (PPR) Genomic Order:  757
Name:  ? Thecc1EG031426 Secondary Identifier:  ? PAC:27444968
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031426 0.5kb upstream 0.5kb upstream 3584 true scaffold_7: 4852168-4855751 Theobroma cacao
Thecc1EG031426 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4855252-4855751 Theobroma cacao
Thecc1EG031426 0.5kb downstream 0.5kb downstream 3584 true scaffold_7: 4851668-4855251 Theobroma cacao
Thecc1EG031426 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4851668-4852167 Theobroma cacao
Thecc1EG031426 1.0kb upstream 1.0kb upstream 4084 true scaffold_7: 4852168-4856251 Theobroma cacao
Thecc1EG031426 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4855252-4856251 Theobroma cacao
Thecc1EG031426 1.0kb downstream 1.0kb downstream 4084 true scaffold_7: 4851168-4855251 Theobroma cacao
Thecc1EG031426 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4851168-4852167 Theobroma cacao
Thecc1EG031426 2.0kb upstream 2.0kb upstream 5084 true scaffold_7: 4852168-4857251 Theobroma cacao
Thecc1EG031426 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4855252-4857251 Theobroma cacao
Thecc1EG031426 2.0kb downstream 2.0kb downstream 5084 true scaffold_7: 4850168-4855251 Theobroma cacao
Thecc1EG031426 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4850168-4852167 Theobroma cacao
Thecc1EG031426 5.0kb upstream 5.0kb upstream 8084 true scaffold_7: 4852168-4860251 Theobroma cacao
Thecc1EG031426 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4855252-4860251 Theobroma cacao
Thecc1EG031426 5.0kb downstream 5.0kb downstream 8084 true scaffold_7: 4847168-4855251 Theobroma cacao
Thecc1EG031426 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4847168-4852167 Theobroma cacao
Thecc1EG031426 10.0kb upstream 10.0kb upstream 13084 true scaffold_7: 4852168-4865251 Theobroma cacao
Thecc1EG031426 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4855252-4865251 Theobroma cacao
Thecc1EG031426 10.0kb downstream 10.0kb downstream 13084 true scaffold_7: 4842168-4855251 Theobroma cacao
Thecc1EG031426 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4842168-4852167 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824874 5264 Brassicales-Malvales View MSA
124347565 5266 SBM View MSA
124246602 5268 Malvidae View MSA
124072029 5270 Rosid View MSA
123744765 5271 Pentapetalae View MSA
122790014 5272 Eudicot View MSA
122049142 5273 Angiosperm View MSA
121311265 5274 Embryophyte View MSA
123348580 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain