Gene : Pavir.3NG134000 P. virgatum v4.1
Defline:  (1 of 4) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  1230
Name:  ? Pavir.3NG134000 Secondary Identifier:  ? PAC:37644127
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CALVIN-PWY Panicum virgatum pathologic  
Pvirgatum PHOTOALL-PWY Panicum virgatum pathologic  
Pvirgatum PWY-5723 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG134000 0.5kb upstream 0.5kb upstream 4091 true Chr03N: 16935671-16939761 Panicum virgatum
Pavir.3NG134000 0.5kb upstream 0.5kb upstream 500 false Chr03N: 16935671-16936170 Panicum virgatum
Pavir.3NG134000 0.5kb downstream 0.5kb downstream 4091 true Chr03N: 16936171-16940261 Panicum virgatum
Pavir.3NG134000 0.5kb downstream 0.5kb downstream 500 false Chr03N: 16939762-16940261 Panicum virgatum
Pavir.3NG134000 1.0kb upstream 1.0kb upstream 4591 true Chr03N: 16935171-16939761 Panicum virgatum
Pavir.3NG134000 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 16935171-16936170 Panicum virgatum
Pavir.3NG134000 1.0kb downstream 1.0kb downstream 4591 true Chr03N: 16936171-16940761 Panicum virgatum
Pavir.3NG134000 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 16939762-16940761 Panicum virgatum
Pavir.3NG134000 2.0kb upstream 2.0kb upstream 5591 true Chr03N: 16934171-16939761 Panicum virgatum
Pavir.3NG134000 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 16934171-16936170 Panicum virgatum
Pavir.3NG134000 2.0kb downstream 2.0kb downstream 5591 true Chr03N: 16936171-16941761 Panicum virgatum
Pavir.3NG134000 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 16939762-16941761 Panicum virgatum
Pavir.3NG134000 5.0kb upstream 5.0kb upstream 8591 true Chr03N: 16931171-16939761 Panicum virgatum
Pavir.3NG134000 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 16931171-16936170 Panicum virgatum
Pavir.3NG134000 5.0kb downstream 5.0kb downstream 8591 true Chr03N: 16936171-16944761 Panicum virgatum
Pavir.3NG134000 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 16939762-16944761 Panicum virgatum
Pavir.3NG134000 10.0kb upstream 10.0kb upstream 13591 true Chr03N: 16926171-16939761 Panicum virgatum
Pavir.3NG134000 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 16926171-16936170 Panicum virgatum
Pavir.3NG134000 10.0kb downstream 10.0kb downstream 13591 true Chr03N: 16936171-16949761 Panicum virgatum
Pavir.3NG134000 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 16939762-16949761 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199516 5267 Panicoideae View MSA
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain