Gene : Pavir.3NG101300 P. virgatum v4.1
Defline:  (1 of 5) PF01936//PF12872 - NYN domain (NYN) // OST-HTH/LOTUS domain (OST-HTH) Genomic Order:  937
Name:  ? Pavir.3NG101300 Secondary Identifier:  ? PAC:37641256
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG101300 0.5kb upstream 0.5kb upstream 7952 true Chr03N: 12088376-12096327 Panicum virgatum
Pavir.3NG101300 0.5kb upstream 0.5kb upstream 500 false Chr03N: 12095828-12096327 Panicum virgatum
Pavir.3NG101300 0.5kb downstream 0.5kb downstream 7952 true Chr03N: 12087876-12095827 Panicum virgatum
Pavir.3NG101300 0.5kb downstream 0.5kb downstream 500 false Chr03N: 12087876-12088375 Panicum virgatum
Pavir.3NG101300 1.0kb upstream 1.0kb upstream 8452 true Chr03N: 12088376-12096827 Panicum virgatum
Pavir.3NG101300 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 12095828-12096827 Panicum virgatum
Pavir.3NG101300 1.0kb downstream 1.0kb downstream 8452 true Chr03N: 12087376-12095827 Panicum virgatum
Pavir.3NG101300 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 12087376-12088375 Panicum virgatum
Pavir.3NG101300 2.0kb upstream 2.0kb upstream 9452 true Chr03N: 12088376-12097827 Panicum virgatum
Pavir.3NG101300 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 12095828-12097827 Panicum virgatum
Pavir.3NG101300 2.0kb downstream 2.0kb downstream 9452 true Chr03N: 12086376-12095827 Panicum virgatum
Pavir.3NG101300 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 12086376-12088375 Panicum virgatum
Pavir.3NG101300 5.0kb upstream 5.0kb upstream 12452 true Chr03N: 12088376-12100827 Panicum virgatum
Pavir.3NG101300 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 12095828-12100827 Panicum virgatum
Pavir.3NG101300 5.0kb downstream 5.0kb downstream 12452 true Chr03N: 12083376-12095827 Panicum virgatum
Pavir.3NG101300 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 12083376-12088375 Panicum virgatum
Pavir.3NG101300 10.0kb upstream 10.0kb upstream 17452 true Chr03N: 12088376-12105827 Panicum virgatum
Pavir.3NG101300 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 12095828-12105827 Panicum virgatum
Pavir.3NG101300 10.0kb downstream 10.0kb downstream 17452 true Chr03N: 12078376-12095827 Panicum virgatum
Pavir.3NG101300 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 12078376-12088375 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196676 5267 Panicoideae View MSA
124581421 5269 Grass View MSA
122044167 5273 Angiosperm View MSA
121346389 5274 Embryophyte View MSA
123380376 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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