Gene : Pavir.3NG111400 P. virgatum v4.1
Defline:  (1 of 4) PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Genomic Order:  1029
Name:  ? Pavir.3NG111400 Secondary Identifier:  ? PAC:37641748
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG111400 0.5kb upstream 0.5kb upstream 5707 true Chr03N: 14312422-14318128 Panicum virgatum
Pavir.3NG111400 0.5kb upstream 0.5kb upstream 500 false Chr03N: 14312422-14312921 Panicum virgatum
Pavir.3NG111400 0.5kb downstream 0.5kb downstream 5707 true Chr03N: 14312922-14318628 Panicum virgatum
Pavir.3NG111400 0.5kb downstream 0.5kb downstream 500 false Chr03N: 14318129-14318628 Panicum virgatum
Pavir.3NG111400 1.0kb upstream 1.0kb upstream 6207 true Chr03N: 14311922-14318128 Panicum virgatum
Pavir.3NG111400 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 14311922-14312921 Panicum virgatum
Pavir.3NG111400 1.0kb downstream 1.0kb downstream 6207 true Chr03N: 14312922-14319128 Panicum virgatum
Pavir.3NG111400 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 14318129-14319128 Panicum virgatum
Pavir.3NG111400 2.0kb upstream 2.0kb upstream 7207 true Chr03N: 14310922-14318128 Panicum virgatum
Pavir.3NG111400 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 14310922-14312921 Panicum virgatum
Pavir.3NG111400 2.0kb downstream 2.0kb downstream 7207 true Chr03N: 14312922-14320128 Panicum virgatum
Pavir.3NG111400 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 14318129-14320128 Panicum virgatum
Pavir.3NG111400 5.0kb upstream 5.0kb upstream 10207 true Chr03N: 14307922-14318128 Panicum virgatum
Pavir.3NG111400 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 14307922-14312921 Panicum virgatum
Pavir.3NG111400 5.0kb downstream 5.0kb downstream 10207 true Chr03N: 14312922-14323128 Panicum virgatum
Pavir.3NG111400 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 14318129-14323128 Panicum virgatum
Pavir.3NG111400 10.0kb upstream 10.0kb upstream 15207 true Chr03N: 14302922-14318128 Panicum virgatum
Pavir.3NG111400 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 14302922-14312921 Panicum virgatum
Pavir.3NG111400 10.0kb downstream 10.0kb downstream 15207 true Chr03N: 14312922-14328128 Panicum virgatum
Pavir.3NG111400 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 14318129-14328128 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031029 5273 Angiosperm View MSA
122097094 5267 Panicoideae Singleton cluster - no MSA
124394069 5269 Grass Singleton cluster - no MSA
121300129 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain