Gene : Pavir.3NG106400 P. virgatum v4.1
Defline:  (1 of 4) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  986
Name:  ? Pavir.3NG106400 Secondary Identifier:  ? PAC:37640669
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CALVIN-PWY Panicum virgatum pathologic  
Pvirgatum PHOTOALL-PWY Panicum virgatum pathologic  
Pvirgatum PWY-5723 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG106400 0.5kb upstream 0.5kb upstream 1578 true Chr03N: 13266937-13268514 Panicum virgatum
Pavir.3NG106400 0.5kb upstream 0.5kb upstream 500 false Chr03N: 13266937-13267436 Panicum virgatum
Pavir.3NG106400 0.5kb downstream 0.5kb downstream 1578 true Chr03N: 13267437-13269014 Panicum virgatum
Pavir.3NG106400 0.5kb downstream 0.5kb downstream 500 false Chr03N: 13268515-13269014 Panicum virgatum
Pavir.3NG106400 1.0kb upstream 1.0kb upstream 2078 true Chr03N: 13266437-13268514 Panicum virgatum
Pavir.3NG106400 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 13266437-13267436 Panicum virgatum
Pavir.3NG106400 1.0kb downstream 1.0kb downstream 2078 true Chr03N: 13267437-13269514 Panicum virgatum
Pavir.3NG106400 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 13268515-13269514 Panicum virgatum
Pavir.3NG106400 2.0kb upstream 2.0kb upstream 3078 true Chr03N: 13265437-13268514 Panicum virgatum
Pavir.3NG106400 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 13265437-13267436 Panicum virgatum
Pavir.3NG106400 2.0kb downstream 2.0kb downstream 3078 true Chr03N: 13267437-13270514 Panicum virgatum
Pavir.3NG106400 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 13268515-13270514 Panicum virgatum
Pavir.3NG106400 5.0kb upstream 5.0kb upstream 6078 true Chr03N: 13262437-13268514 Panicum virgatum
Pavir.3NG106400 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 13262437-13267436 Panicum virgatum
Pavir.3NG106400 5.0kb downstream 5.0kb downstream 6078 true Chr03N: 13267437-13273514 Panicum virgatum
Pavir.3NG106400 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 13268515-13273514 Panicum virgatum
Pavir.3NG106400 10.0kb upstream 10.0kb upstream 11078 true Chr03N: 13257437-13268514 Panicum virgatum
Pavir.3NG106400 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 13257437-13267436 Panicum virgatum
Pavir.3NG106400 10.0kb downstream 10.0kb downstream 11078 true Chr03N: 13267437-13278514 Panicum virgatum
Pavir.3NG106400 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 13268515-13278514 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199516 5267 Panicoideae View MSA
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain