Gene : Pavir.3NG089500 P. virgatum v4.1
Defline:  (1 of 2) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  828
Name:  ? Pavir.3NG089500 Secondary Identifier:  ? PAC:37642378
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PYRIDNUCSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG089500 0.5kb upstream 0.5kb upstream 9031 true Chr03N: 9179044-9188074 Panicum virgatum
Pavir.3NG089500 0.5kb upstream 0.5kb upstream 500 false Chr03N: 9179044-9179543 Panicum virgatum
Pavir.3NG089500 0.5kb downstream 0.5kb downstream 9031 true Chr03N: 9179544-9188574 Panicum virgatum
Pavir.3NG089500 0.5kb downstream 0.5kb downstream 500 false Chr03N: 9188075-9188574 Panicum virgatum
Pavir.3NG089500 1.0kb upstream 1.0kb upstream 9531 true Chr03N: 9178544-9188074 Panicum virgatum
Pavir.3NG089500 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 9178544-9179543 Panicum virgatum
Pavir.3NG089500 1.0kb downstream 1.0kb downstream 9531 true Chr03N: 9179544-9189074 Panicum virgatum
Pavir.3NG089500 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 9188075-9189074 Panicum virgatum
Pavir.3NG089500 2.0kb upstream 2.0kb upstream 10531 true Chr03N: 9177544-9188074 Panicum virgatum
Pavir.3NG089500 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 9177544-9179543 Panicum virgatum
Pavir.3NG089500 2.0kb downstream 2.0kb downstream 10531 true Chr03N: 9179544-9190074 Panicum virgatum
Pavir.3NG089500 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 9188075-9190074 Panicum virgatum
Pavir.3NG089500 5.0kb upstream 5.0kb upstream 13531 true Chr03N: 9174544-9188074 Panicum virgatum
Pavir.3NG089500 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 9174544-9179543 Panicum virgatum
Pavir.3NG089500 5.0kb downstream 5.0kb downstream 13531 true Chr03N: 9179544-9193074 Panicum virgatum
Pavir.3NG089500 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 9188075-9193074 Panicum virgatum
Pavir.3NG089500 10.0kb upstream 10.0kb upstream 18531 true Chr03N: 9169544-9188074 Panicum virgatum
Pavir.3NG089500 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 9169544-9179543 Panicum virgatum
Pavir.3NG089500 10.0kb downstream 10.0kb downstream 18531 true Chr03N: 9179544-9198074 Panicum virgatum
Pavir.3NG089500 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 9188075-9198074 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194133 5267 Panicoideae View MSA
124584011 5269 Grass View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain