Gene : Thecc1EG031360 T. cacao v1.1
Defline:  (1 of 1) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  705
Name:  ? Thecc1EG031360 Secondary Identifier:  ? PAC:27444272
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-162 Theobroma cacao pathologic  
Tcacao PWY-5686 Theobroma cacao pathologic  
Tcacao PWY-7211 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031360 0.5kb upstream 0.5kb upstream 4676 true scaffold_7: 4398421-4403096 Theobroma cacao
Thecc1EG031360 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4398421-4398920 Theobroma cacao
Thecc1EG031360 0.5kb downstream 0.5kb downstream 4676 true scaffold_7: 4398921-4403596 Theobroma cacao
Thecc1EG031360 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4403097-4403596 Theobroma cacao
Thecc1EG031360 1.0kb upstream 1.0kb upstream 5176 true scaffold_7: 4397921-4403096 Theobroma cacao
Thecc1EG031360 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4397921-4398920 Theobroma cacao
Thecc1EG031360 1.0kb downstream 1.0kb downstream 5176 true scaffold_7: 4398921-4404096 Theobroma cacao
Thecc1EG031360 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4403097-4404096 Theobroma cacao
Thecc1EG031360 2.0kb upstream 2.0kb upstream 6176 true scaffold_7: 4396921-4403096 Theobroma cacao
Thecc1EG031360 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4396921-4398920 Theobroma cacao
Thecc1EG031360 2.0kb downstream 2.0kb downstream 6176 true scaffold_7: 4398921-4405096 Theobroma cacao
Thecc1EG031360 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4403097-4405096 Theobroma cacao
Thecc1EG031360 5.0kb upstream 5.0kb upstream 9176 true scaffold_7: 4393921-4403096 Theobroma cacao
Thecc1EG031360 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4393921-4398920 Theobroma cacao
Thecc1EG031360 5.0kb downstream 5.0kb downstream 9176 true scaffold_7: 4398921-4408096 Theobroma cacao
Thecc1EG031360 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4403097-4408096 Theobroma cacao
Thecc1EG031360 10.0kb upstream 10.0kb upstream 14176 true scaffold_7: 4388921-4403096 Theobroma cacao
Thecc1EG031360 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4388921-4398920 Theobroma cacao
Thecc1EG031360 10.0kb downstream 10.0kb downstream 14176 true scaffold_7: 4398921-4413096 Theobroma cacao
Thecc1EG031360 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4403097-4413096 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840006 5264 Brassicales-Malvales View MSA
124338602 5266 SBM View MSA
124250162 5268 Malvidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain