Gene : Thecc1EG031335 T. cacao v1.1
Defline:  (1 of 1) PTHR10742//PTHR10742:SF210 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Genomic Order:  684
Name:  ? Thecc1EG031335 Secondary Identifier:  ? PAC:27445947
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6441 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031335 0.5kb upstream 0.5kb upstream 4288 true scaffold_7: 4264106-4268393 Theobroma cacao
Thecc1EG031335 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4267894-4268393 Theobroma cacao
Thecc1EG031335 0.5kb downstream 0.5kb downstream 4288 true scaffold_7: 4263606-4267893 Theobroma cacao
Thecc1EG031335 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4263606-4264105 Theobroma cacao
Thecc1EG031335 1.0kb upstream 1.0kb upstream 4788 true scaffold_7: 4264106-4268893 Theobroma cacao
Thecc1EG031335 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4267894-4268893 Theobroma cacao
Thecc1EG031335 1.0kb downstream 1.0kb downstream 4788 true scaffold_7: 4263106-4267893 Theobroma cacao
Thecc1EG031335 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4263106-4264105 Theobroma cacao
Thecc1EG031335 2.0kb upstream 2.0kb upstream 5788 true scaffold_7: 4264106-4269893 Theobroma cacao
Thecc1EG031335 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4267894-4269893 Theobroma cacao
Thecc1EG031335 2.0kb downstream 2.0kb downstream 5788 true scaffold_7: 4262106-4267893 Theobroma cacao
Thecc1EG031335 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4262106-4264105 Theobroma cacao
Thecc1EG031335 5.0kb upstream 5.0kb upstream 8788 true scaffold_7: 4264106-4272893 Theobroma cacao
Thecc1EG031335 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4267894-4272893 Theobroma cacao
Thecc1EG031335 5.0kb downstream 5.0kb downstream 8788 true scaffold_7: 4259106-4267893 Theobroma cacao
Thecc1EG031335 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4259106-4264105 Theobroma cacao
Thecc1EG031335 10.0kb upstream 10.0kb upstream 13788 true scaffold_7: 4264106-4277893 Theobroma cacao
Thecc1EG031335 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4267894-4277893 Theobroma cacao
Thecc1EG031335 10.0kb downstream 10.0kb downstream 13788 true scaffold_7: 4254106-4267893 Theobroma cacao
Thecc1EG031335 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4254106-4264105 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829075 5264 Brassicales-Malvales View MSA
124336597 5266 SBM View MSA
124242009 5268 Malvidae View MSA
124065563 5270 Rosid View MSA
123738735 5271 Pentapetalae View MSA
122791879 5272 Eudicot View MSA
122041755 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain