Gene : Pavir.3NG213600 P. virgatum v4.1
Defline:  (1 of 2) PF02037//PF10172 - SAP domain (SAP) // Det1 complexing ubiquitin ligase (DDA1) Genomic Order:  1953
Name:  ? Pavir.3NG213600 Secondary Identifier:  ? PAC:37642797
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG213600 0.5kb upstream 0.5kb upstream 8335 true Chr03N: 40652713-40661047 Panicum virgatum
Pavir.3NG213600 0.5kb upstream 0.5kb upstream 500 false Chr03N: 40660548-40661047 Panicum virgatum
Pavir.3NG213600 0.5kb downstream 0.5kb downstream 8335 true Chr03N: 40652213-40660547 Panicum virgatum
Pavir.3NG213600 0.5kb downstream 0.5kb downstream 500 false Chr03N: 40652213-40652712 Panicum virgatum
Pavir.3NG213600 1.0kb upstream 1.0kb upstream 8835 true Chr03N: 40652713-40661547 Panicum virgatum
Pavir.3NG213600 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 40660548-40661547 Panicum virgatum
Pavir.3NG213600 1.0kb downstream 1.0kb downstream 8835 true Chr03N: 40651713-40660547 Panicum virgatum
Pavir.3NG213600 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 40651713-40652712 Panicum virgatum
Pavir.3NG213600 2.0kb upstream 2.0kb upstream 9835 true Chr03N: 40652713-40662547 Panicum virgatum
Pavir.3NG213600 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 40660548-40662547 Panicum virgatum
Pavir.3NG213600 2.0kb downstream 2.0kb downstream 9835 true Chr03N: 40650713-40660547 Panicum virgatum
Pavir.3NG213600 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 40650713-40652712 Panicum virgatum
Pavir.3NG213600 5.0kb upstream 5.0kb upstream 12835 true Chr03N: 40652713-40665547 Panicum virgatum
Pavir.3NG213600 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 40660548-40665547 Panicum virgatum
Pavir.3NG213600 5.0kb downstream 5.0kb downstream 12835 true Chr03N: 40647713-40660547 Panicum virgatum
Pavir.3NG213600 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 40647713-40652712 Panicum virgatum
Pavir.3NG213600 10.0kb upstream 10.0kb upstream 17835 true Chr03N: 40652713-40670547 Panicum virgatum
Pavir.3NG213600 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 40660548-40670547 Panicum virgatum
Pavir.3NG213600 10.0kb downstream 10.0kb downstream 17835 true Chr03N: 40642713-40660547 Panicum virgatum
Pavir.3NG213600 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 40642713-40652712 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122117585 5267 Panicoideae View MSA
124588892 5269 Grass View MSA
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain