Gene : Pavir.3NG187100 P. virgatum v4.1
Defline:  (1 of 2) PTHR15657:SF1 - THYROID TRANSCRIPTION FACTOR 1-ASSOCIATED PROTEIN 26 Genomic Order:  1716
Name:  ? Pavir.3NG187100 Secondary Identifier:  ? PAC:37641421
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG187100 0.5kb upstream 0.5kb upstream 2619 true Chr03N: 35119624-35122242 Panicum virgatum
Pavir.3NG187100 0.5kb upstream 0.5kb upstream 500 false Chr03N: 35119624-35120123 Panicum virgatum
Pavir.3NG187100 0.5kb downstream 0.5kb downstream 2619 true Chr03N: 35120124-35122742 Panicum virgatum
Pavir.3NG187100 0.5kb downstream 0.5kb downstream 500 false Chr03N: 35122243-35122742 Panicum virgatum
Pavir.3NG187100 1.0kb upstream 1.0kb upstream 3119 true Chr03N: 35119124-35122242 Panicum virgatum
Pavir.3NG187100 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 35119124-35120123 Panicum virgatum
Pavir.3NG187100 1.0kb downstream 1.0kb downstream 3119 true Chr03N: 35120124-35123242 Panicum virgatum
Pavir.3NG187100 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 35122243-35123242 Panicum virgatum
Pavir.3NG187100 2.0kb upstream 2.0kb upstream 4119 true Chr03N: 35118124-35122242 Panicum virgatum
Pavir.3NG187100 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 35118124-35120123 Panicum virgatum
Pavir.3NG187100 2.0kb downstream 2.0kb downstream 4119 true Chr03N: 35120124-35124242 Panicum virgatum
Pavir.3NG187100 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 35122243-35124242 Panicum virgatum
Pavir.3NG187100 5.0kb upstream 5.0kb upstream 7119 true Chr03N: 35115124-35122242 Panicum virgatum
Pavir.3NG187100 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 35115124-35120123 Panicum virgatum
Pavir.3NG187100 5.0kb downstream 5.0kb downstream 7119 true Chr03N: 35120124-35127242 Panicum virgatum
Pavir.3NG187100 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 35122243-35127242 Panicum virgatum
Pavir.3NG187100 10.0kb upstream 10.0kb upstream 12119 true Chr03N: 35110124-35122242 Panicum virgatum
Pavir.3NG187100 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 35110124-35120123 Panicum virgatum
Pavir.3NG187100 10.0kb downstream 10.0kb downstream 12119 true Chr03N: 35120124-35132242 Panicum virgatum
Pavir.3NG187100 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 35122243-35132242 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122097007 5267 Panicoideae Singleton cluster - no MSA
124583736 5269 Grass View MSA
122042448 5273 Angiosperm View MSA
121343985 5274 Embryophyte View MSA
123426667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain