Gene : Pavir.3NG172700 P. virgatum v4.1
Defline:  (1 of 3) 2.5.1.30 - Heptaprenyl diphosphate synthase / Trans-hexaprenyltranstransferase Genomic Order:  1584
Name:  ? Pavir.3NG172700 Secondary Identifier:  ? PAC:37641827
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8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum HEXPPSYN-PWY Panicum virgatum pathologic  
Pvirgatum PWY-5120 Panicum virgatum pathologic  
Pvirgatum PWY-5783 Panicum virgatum pathologic  
Pvirgatum PWY-5805 Panicum virgatum pathologic  
Pvirgatum PWY-5807 Panicum virgatum pathologic  
Pvirgatum PWY-5864 Panicum virgatum pathologic  
Pvirgatum PWY-5910 Panicum virgatum pathologic  
Pvirgatum PWY-6520 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3NG172700 0.5kb upstream 0.5kb upstream 10424 true Chr03N: 30314151-30324574 Panicum virgatum
Pavir.3NG172700 0.5kb upstream 0.5kb upstream 500 false Chr03N: 30324075-30324574 Panicum virgatum
Pavir.3NG172700 0.5kb downstream 0.5kb downstream 10424 true Chr03N: 30313651-30324074 Panicum virgatum
Pavir.3NG172700 0.5kb downstream 0.5kb downstream 500 false Chr03N: 30313651-30314150 Panicum virgatum
Pavir.3NG172700 1.0kb upstream 1.0kb upstream 10924 true Chr03N: 30314151-30325074 Panicum virgatum
Pavir.3NG172700 1.0kb upstream 1.0kb upstream 1000 false Chr03N: 30324075-30325074 Panicum virgatum
Pavir.3NG172700 1.0kb downstream 1.0kb downstream 10924 true Chr03N: 30313151-30324074 Panicum virgatum
Pavir.3NG172700 1.0kb downstream 1.0kb downstream 1000 false Chr03N: 30313151-30314150 Panicum virgatum
Pavir.3NG172700 2.0kb upstream 2.0kb upstream 11924 true Chr03N: 30314151-30326074 Panicum virgatum
Pavir.3NG172700 2.0kb upstream 2.0kb upstream 2000 false Chr03N: 30324075-30326074 Panicum virgatum
Pavir.3NG172700 2.0kb downstream 2.0kb downstream 11924 true Chr03N: 30312151-30324074 Panicum virgatum
Pavir.3NG172700 2.0kb downstream 2.0kb downstream 2000 false Chr03N: 30312151-30314150 Panicum virgatum
Pavir.3NG172700 5.0kb upstream 5.0kb upstream 14924 true Chr03N: 30314151-30329074 Panicum virgatum
Pavir.3NG172700 5.0kb upstream 5.0kb upstream 5000 false Chr03N: 30324075-30329074 Panicum virgatum
Pavir.3NG172700 5.0kb downstream 5.0kb downstream 14924 true Chr03N: 30309151-30324074 Panicum virgatum
Pavir.3NG172700 5.0kb downstream 5.0kb downstream 5000 false Chr03N: 30309151-30314150 Panicum virgatum
Pavir.3NG172700 10.0kb upstream 10.0kb upstream 19924 true Chr03N: 30314151-30334074 Panicum virgatum
Pavir.3NG172700 10.0kb upstream 10.0kb upstream 10000 false Chr03N: 30324075-30334074 Panicum virgatum
Pavir.3NG172700 10.0kb downstream 10.0kb downstream 19924 true Chr03N: 30304151-30324074 Panicum virgatum
Pavir.3NG172700 10.0kb downstream 10.0kb downstream 10000 false Chr03N: 30304151-30314150 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
122182830 5267 Panicoideae View MSA
124570565 5269 Grass View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain