Gene : Thecc1EG031269 T. cacao v1.1
Defline:  (1 of 24) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  624
Name:  ? Thecc1EG031269 Secondary Identifier:  ? PAC:27444974
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031269 0.5kb upstream 0.5kb upstream 5008 true scaffold_7: 3901665-3906672 Theobroma cacao
Thecc1EG031269 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3906173-3906672 Theobroma cacao
Thecc1EG031269 0.5kb downstream 0.5kb downstream 5008 true scaffold_7: 3901165-3906172 Theobroma cacao
Thecc1EG031269 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3901165-3901664 Theobroma cacao
Thecc1EG031269 1.0kb upstream 1.0kb upstream 5508 true scaffold_7: 3901665-3907172 Theobroma cacao
Thecc1EG031269 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3906173-3907172 Theobroma cacao
Thecc1EG031269 1.0kb downstream 1.0kb downstream 5508 true scaffold_7: 3900665-3906172 Theobroma cacao
Thecc1EG031269 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3900665-3901664 Theobroma cacao
Thecc1EG031269 2.0kb upstream 2.0kb upstream 6508 true scaffold_7: 3901665-3908172 Theobroma cacao
Thecc1EG031269 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3906173-3908172 Theobroma cacao
Thecc1EG031269 2.0kb downstream 2.0kb downstream 6508 true scaffold_7: 3899665-3906172 Theobroma cacao
Thecc1EG031269 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3899665-3901664 Theobroma cacao
Thecc1EG031269 5.0kb upstream 5.0kb upstream 9508 true scaffold_7: 3901665-3911172 Theobroma cacao
Thecc1EG031269 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3906173-3911172 Theobroma cacao
Thecc1EG031269 5.0kb downstream 5.0kb downstream 9508 true scaffold_7: 3896665-3906172 Theobroma cacao
Thecc1EG031269 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3896665-3901664 Theobroma cacao
Thecc1EG031269 10.0kb upstream 10.0kb upstream 14508 true scaffold_7: 3901665-3916172 Theobroma cacao
Thecc1EG031269 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3906173-3916172 Theobroma cacao
Thecc1EG031269 10.0kb downstream 10.0kb downstream 14508 true scaffold_7: 3891665-3906172 Theobroma cacao
Thecc1EG031269 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3891665-3901664 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841727 5264 Brassicales-Malvales View MSA
124322991 5266 SBM View MSA
124252991 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain