Gene : Thecc1EG031732 T. cacao v1.1

Defline:  (1 of 2) PF07460 - NUMOD3 motif (2 copies) (NUMOD3) Genomic Order:  994
Name:  ? Thecc1EG031732 Secondary Identifier:  ? PAC:27445025

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031732 0.5kb upstream 0.5kb upstream 5317 true scaffold_7: 6532338-6537654 Theobroma cacao
Thecc1EG031732 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6532338-6532837 Theobroma cacao
Thecc1EG031732 0.5kb downstream 0.5kb downstream 5317 true scaffold_7: 6532838-6538154 Theobroma cacao
Thecc1EG031732 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6537655-6538154 Theobroma cacao
Thecc1EG031732 1.0kb upstream 1.0kb upstream 5817 true scaffold_7: 6531838-6537654 Theobroma cacao
Thecc1EG031732 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6531838-6532837 Theobroma cacao
Thecc1EG031732 1.0kb downstream 1.0kb downstream 5817 true scaffold_7: 6532838-6538654 Theobroma cacao
Thecc1EG031732 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6537655-6538654 Theobroma cacao
Thecc1EG031732 2.0kb upstream 2.0kb upstream 6817 true scaffold_7: 6530838-6537654 Theobroma cacao
Thecc1EG031732 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6530838-6532837 Theobroma cacao
Thecc1EG031732 2.0kb downstream 2.0kb downstream 6817 true scaffold_7: 6532838-6539654 Theobroma cacao
Thecc1EG031732 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6537655-6539654 Theobroma cacao
Thecc1EG031732 5.0kb upstream 5.0kb upstream 9817 true scaffold_7: 6527838-6537654 Theobroma cacao
Thecc1EG031732 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6527838-6532837 Theobroma cacao
Thecc1EG031732 5.0kb downstream 5.0kb downstream 9817 true scaffold_7: 6532838-6542654 Theobroma cacao
Thecc1EG031732 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6537655-6542654 Theobroma cacao
Thecc1EG031732 10.0kb upstream 10.0kb upstream 14817 true scaffold_7: 6522838-6537654 Theobroma cacao
Thecc1EG031732 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6522838-6532837 Theobroma cacao
Thecc1EG031732 10.0kb downstream 10.0kb downstream 14817 true scaffold_7: 6532838-6547654 Theobroma cacao
Thecc1EG031732 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6537655-6547654 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828495 5264 Brassicales-Malvales View MSA
124341605 5266 SBM View MSA
124244424 5268 Malvidae View MSA
124067823 5270 Rosid View MSA
123741398 5271 Pentapetalae View MSA
122790340 5272 Eudicot View MSA
122047787 5273 Angiosperm View MSA
121349375 5274 Embryophyte View MSA
123428133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain