Gene : Thecc1EG031645 T. cacao v1.1
Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21 Genomic Order:  923
Name:  ? Thecc1EG031645 Secondary Identifier:  ? PAC:27445452
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031645 0.5kb upstream 0.5kb upstream 4358 true scaffold_7: 6035681-6040038 Theobroma cacao
Thecc1EG031645 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6035681-6036180 Theobroma cacao
Thecc1EG031645 0.5kb downstream 0.5kb downstream 4358 true scaffold_7: 6036181-6040538 Theobroma cacao
Thecc1EG031645 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6040039-6040538 Theobroma cacao
Thecc1EG031645 1.0kb upstream 1.0kb upstream 4858 true scaffold_7: 6035181-6040038 Theobroma cacao
Thecc1EG031645 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6035181-6036180 Theobroma cacao
Thecc1EG031645 1.0kb downstream 1.0kb downstream 4858 true scaffold_7: 6036181-6041038 Theobroma cacao
Thecc1EG031645 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6040039-6041038 Theobroma cacao
Thecc1EG031645 2.0kb upstream 2.0kb upstream 5858 true scaffold_7: 6034181-6040038 Theobroma cacao
Thecc1EG031645 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6034181-6036180 Theobroma cacao
Thecc1EG031645 2.0kb downstream 2.0kb downstream 5858 true scaffold_7: 6036181-6042038 Theobroma cacao
Thecc1EG031645 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6040039-6042038 Theobroma cacao
Thecc1EG031645 5.0kb upstream 5.0kb upstream 8858 true scaffold_7: 6031181-6040038 Theobroma cacao
Thecc1EG031645 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6031181-6036180 Theobroma cacao
Thecc1EG031645 5.0kb downstream 5.0kb downstream 8858 true scaffold_7: 6036181-6045038 Theobroma cacao
Thecc1EG031645 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6040039-6045038 Theobroma cacao
Thecc1EG031645 10.0kb upstream 10.0kb upstream 13858 true scaffold_7: 6026181-6040038 Theobroma cacao
Thecc1EG031645 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6026181-6036180 Theobroma cacao
Thecc1EG031645 10.0kb downstream 10.0kb downstream 13858 true scaffold_7: 6036181-6050038 Theobroma cacao
Thecc1EG031645 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6040039-6050038 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828349 5264 Brassicales-Malvales View MSA
124340974 5266 SBM View MSA
124238687 5268 Malvidae View MSA
124064105 5270 Rosid View MSA
123740450 5271 Pentapetalae View MSA
122790710 5272 Eudicot View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain