Gene : Thecc1EG031621 T. cacao v1.1

Defline:  (1 of 1) PTHR11751//PTHR11751:SF387 - SUBGROUP I AMINOTRANSFERASE RELATED // AMINOTRANSFERASE TAT2-RELATED Genomic Order:  905
Name:  ? Thecc1EG031621 Secondary Identifier:  ? PAC:27446464

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031621 0.5kb upstream 0.5kb upstream 4498 true scaffold_7: 5915516-5920013 Theobroma cacao
Thecc1EG031621 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5915516-5916015 Theobroma cacao
Thecc1EG031621 0.5kb downstream 0.5kb downstream 4498 true scaffold_7: 5916016-5920513 Theobroma cacao
Thecc1EG031621 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5920014-5920513 Theobroma cacao
Thecc1EG031621 1.0kb upstream 1.0kb upstream 4998 true scaffold_7: 5915016-5920013 Theobroma cacao
Thecc1EG031621 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5915016-5916015 Theobroma cacao
Thecc1EG031621 1.0kb downstream 1.0kb downstream 4998 true scaffold_7: 5916016-5921013 Theobroma cacao
Thecc1EG031621 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5920014-5921013 Theobroma cacao
Thecc1EG031621 2.0kb upstream 2.0kb upstream 5998 true scaffold_7: 5914016-5920013 Theobroma cacao
Thecc1EG031621 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5914016-5916015 Theobroma cacao
Thecc1EG031621 2.0kb downstream 2.0kb downstream 5998 true scaffold_7: 5916016-5922013 Theobroma cacao
Thecc1EG031621 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5920014-5922013 Theobroma cacao
Thecc1EG031621 5.0kb upstream 5.0kb upstream 8998 true scaffold_7: 5911016-5920013 Theobroma cacao
Thecc1EG031621 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5911016-5916015 Theobroma cacao
Thecc1EG031621 5.0kb downstream 5.0kb downstream 8998 true scaffold_7: 5916016-5925013 Theobroma cacao
Thecc1EG031621 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5920014-5925013 Theobroma cacao
Thecc1EG031621 10.0kb upstream 10.0kb upstream 13998 true scaffold_7: 5906016-5920013 Theobroma cacao
Thecc1EG031621 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5906016-5916015 Theobroma cacao
Thecc1EG031621 10.0kb downstream 10.0kb downstream 13998 true scaffold_7: 5916016-5930013 Theobroma cacao
Thecc1EG031621 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5920014-5930013 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828003 5264 Brassicales-Malvales View MSA
124346009 5266 SBM View MSA
124239220 5268 Malvidae View MSA
124063132 5270 Rosid View MSA
123742596 5271 Pentapetalae View MSA
122795476 5272 Eudicot View MSA
122051547 5273 Angiosperm View MSA
121351636 5274 Embryophyte View MSA
123426927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain