Gene : Thecc1EG031610 T. cacao v1.1
Defline:  (1 of 45) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  895
Name:  ? Thecc1EG031610 Secondary Identifier:  ? PAC:27445421
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031610 0.5kb upstream 0.5kb upstream 2764 true scaffold_7: 5848127-5850890 Theobroma cacao
Thecc1EG031610 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5848127-5848626 Theobroma cacao
Thecc1EG031610 0.5kb downstream 0.5kb downstream 2764 true scaffold_7: 5848627-5851390 Theobroma cacao
Thecc1EG031610 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5850891-5851390 Theobroma cacao
Thecc1EG031610 1.0kb upstream 1.0kb upstream 3264 true scaffold_7: 5847627-5850890 Theobroma cacao
Thecc1EG031610 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5847627-5848626 Theobroma cacao
Thecc1EG031610 1.0kb downstream 1.0kb downstream 3264 true scaffold_7: 5848627-5851890 Theobroma cacao
Thecc1EG031610 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5850891-5851890 Theobroma cacao
Thecc1EG031610 2.0kb upstream 2.0kb upstream 4264 true scaffold_7: 5846627-5850890 Theobroma cacao
Thecc1EG031610 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5846627-5848626 Theobroma cacao
Thecc1EG031610 2.0kb downstream 2.0kb downstream 4264 true scaffold_7: 5848627-5852890 Theobroma cacao
Thecc1EG031610 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5850891-5852890 Theobroma cacao
Thecc1EG031610 5.0kb upstream 5.0kb upstream 7264 true scaffold_7: 5843627-5850890 Theobroma cacao
Thecc1EG031610 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5843627-5848626 Theobroma cacao
Thecc1EG031610 5.0kb downstream 5.0kb downstream 7264 true scaffold_7: 5848627-5855890 Theobroma cacao
Thecc1EG031610 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5850891-5855890 Theobroma cacao
Thecc1EG031610 10.0kb upstream 10.0kb upstream 12264 true scaffold_7: 5838627-5850890 Theobroma cacao
Thecc1EG031610 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5838627-5848626 Theobroma cacao
Thecc1EG031610 10.0kb downstream 10.0kb downstream 12264 true scaffold_7: 5848627-5860890 Theobroma cacao
Thecc1EG031610 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5850891-5860890 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831176 5264 Brassicales-Malvales View MSA
124341114 5266 SBM View MSA
124242787 5268 Malvidae View MSA
124050205 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain